Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gm45784-201ENSMUST00000188360 142 ntBASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Rps4l-202ENSMUST00000204242 789 ntBASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gm19187-201ENSMUST00000206781 892 ntBASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gm6013-201ENSMUST00000212264 699 ntBASIC10.29□□□□□ -0.76
Thumpd1Q99J36 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Erich3-203ENSMUST00000189969 3460 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Mir8093-201ENSMUST00000185043 137 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm28937-201ENSMUST00000185413 695 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm5370-201ENSMUST00000187187 574 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm29400-201ENSMUST00000187208 695 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm28662-201ENSMUST00000188446 695 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm28251-201ENSMUST00000188835 695 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm37318-201ENSMUST00000194325 695 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm38017-201ENSMUST00000194768 695 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm37287-201ENSMUST00000195449 695 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm37793-201ENSMUST00000195548 695 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm6450-201ENSMUST00000200896 574 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms