Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp3Q91W36 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm22711-201ENSMUST00000116890 133 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm15566-201ENSMUST00000121130 590 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm7666-201ENSMUST00000146631 819 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.1□□□□□ -0.47
Usp3Q91W36 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm29499-201ENSMUST00000189151 486 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm28329-201ENSMUST00000191208 689 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm29171-201ENSMUST00000191397 486 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm38151-201ENSMUST00000195085 289 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Mir7686-201ENSMUST00000200604 57 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm43531-201ENSMUST00000200676 1114 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm42734-201ENSMUST00000201656 878 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp3Q91W36 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Usp3Q91W36 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp3Q91W36 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Usp3Q91W36 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.1□□□□□ -0.47
Usp3Q91W36 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Usp3Q91W36 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.1□□□□□ -0.47
Usp3Q91W36 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Usp3Q91W36 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.09□□□□□ -0.47
Usp3Q91W36 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm15719-201ENSMUST00000120619 635 ntBASIC12.09□□□□□ -0.47
Usp3Q91W36 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm15432-201ENSMUST00000121106 195 ntBASIC12.09□□□□□ -0.47
Usp3Q91W36 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.09□□□□□ -0.47
Usp3Q91W36 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm16285-201ENSMUST00000162999 347 ntBASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm10807-201ENSMUST00000177134 795 ntBASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm43952-201ENSMUST00000203765 751 ntBASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm6108-201ENSMUST00000208365 367 ntBASIC12.09□□□□□ -0.47
Usp3Q91W36 Gm8959-201ENSMUST00000213150 571 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms