Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.41□□□□□ -0.26
StrcQ8VIM6 Gm14633-201ENSMUST00000121152 470 ntBASIC13.41□□□□□ -0.26
StrcQ8VIM6 AA623943-201ENSMUST00000121794 354 ntBASIC13.41□□□□□ -0.26
StrcQ8VIM6 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Gm8618-201ENSMUST00000097570 432 ntBASIC13.41□□□□□ -0.26
StrcQ8VIM6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.41□□□□□ -0.26
StrcQ8VIM6 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
StrcQ8VIM6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 AC153524.2-202ENSMUST00000220401 1794 ntBASIC13.4□□□□□ -0.26
StrcQ8VIM6 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC13.4□□□□□ -0.26
StrcQ8VIM6 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC13.4□□□□□ -0.26
StrcQ8VIM6 Gm13857-201ENSMUST00000139645 173 ntBASIC13.4□□□□□ -0.26
StrcQ8VIM6 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Gm7805-201ENSMUST00000154348 448 ntBASIC13.4□□□□□ -0.26
StrcQ8VIM6 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Gm5424-201ENSMUST00000053865 1240 ntBASIC13.4□□□□□ -0.26
StrcQ8VIM6 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Gm22341-201ENSMUST00000083775 129 ntBASIC13.4□□□□□ -0.26
StrcQ8VIM6 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
StrcQ8VIM6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
StrcQ8VIM6 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gm5291-201ENSMUST00000201965 899 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms