Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Cog3-203ENSMUST00000227473 4197 ntBASIC16.25■□□□□ 0.19
Cd109Q8R422 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cd109Q8R422 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Cd109Q8R422 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cd109Q8R422 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cd109Q8R422 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Cd109Q8R422 Gm15036-201ENSMUST00000118880 400 ntBASIC16.25■□□□□ 0.19
Cd109Q8R422 Gm11502-201ENSMUST00000120917 1211 ntBASIC16.25■□□□□ 0.19
Cd109Q8R422 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Gm17214-201ENSMUST00000164501 541 ntBASIC16.25■□□□□ 0.19
Cd109Q8R422 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cd109Q8R422 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cd109Q8R422 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC16.25■□□□□ 0.19
Cd109Q8R422 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC16.25■□□□□ 0.19
Cd109Q8R422 Gm19013-201ENSMUST00000183895 1222 ntBASIC16.25■□□□□ 0.19
Cd109Q8R422 Gm19014-201ENSMUST00000184828 1189 ntBASIC16.25■□□□□ 0.19
Cd109Q8R422 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC16.25■□□□□ 0.19
Cd109Q8R422 AC140375.1-201ENSMUST00000225421 694 ntBASIC16.25■□□□□ 0.19
Cd109Q8R422 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cd109Q8R422 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC16.25■□□□□ 0.19
Cd109Q8R422 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cd109Q8R422 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd109Q8R422 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd109Q8R422 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd109Q8R422 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd109Q8R422 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd109Q8R422 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd109Q8R422 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Snord17-201ENSMUST00000104526 238 ntBASIC16.24■□□□□ 0.19
Cd109Q8R422 Gm12453-201ENSMUST00000121981 331 ntBASIC16.24■□□□□ 0.19
Cd109Q8R422 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd109Q8R422 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd109Q8R422 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd109Q8R422 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd109Q8R422 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Cd109Q8R422 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Cd109Q8R422 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Btrc-209ENSMUST00000224478 2194 ntBASIC16.23■□□□□ 0.19
Cd109Q8R422 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC16.23■□□□□ 0.19
Cd109Q8R422 Gm37014-201ENSMUST00000194723 2253 ntBASIC16.23■□□□□ 0.19
Cd109Q8R422 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Gm23612-201ENSMUST00000103823 110 ntBASIC16.23■□□□□ 0.19
Cd109Q8R422 Gm14234-201ENSMUST00000119539 845 ntBASIC16.23■□□□□ 0.19
Cd109Q8R422 Gm22846-201ENSMUST00000157706 270 ntBASIC16.23■□□□□ 0.19
Cd109Q8R422 Gm24328-201ENSMUST00000175104 67 ntBASIC16.23■□□□□ 0.19
Cd109Q8R422 Gm23576-201ENSMUST00000179918 110 ntBASIC16.23■□□□□ 0.19
Cd109Q8R422 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC16.23■□□□□ 0.19
Cd109Q8R422 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC16.23■□□□□ 0.19
Cd109Q8R422 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cd109Q8R422 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC16.23■□□□□ 0.19
Cd109Q8R422 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC16.23■□□□□ 0.19
Cd109Q8R422 AC126799.1-201ENSMUST00000221976 246 ntBASIC16.23■□□□□ 0.19
Cd109Q8R422 Gm10254-201ENSMUST00000052888 867 ntBASIC16.23■□□□□ 0.19
Cd109Q8R422 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Cd109Q8R422 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC16.23■□□□□ 0.19
Cd109Q8R422 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cd109Q8R422 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd109Q8R422 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cd109Q8R422 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms