Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.91□□□□□ -0.66
Clrn1Q8K445 Gm38151-201ENSMUST00000195085 289 ntBASIC10.91□□□□□ -0.66
Clrn1Q8K445 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Gm18065-201ENSMUST00000221395 526 ntBASIC10.91□□□□□ -0.66
Clrn1Q8K445 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.91□□□□□ -0.66
Clrn1Q8K445 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.91□□□□□ -0.66
Clrn1Q8K445 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.91□□□□□ -0.66
Clrn1Q8K445 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Gm13263-201ENSMUST00000121271 838 ntBASIC10.9□□□□□ -0.66
Clrn1Q8K445 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.9□□□□□ -0.66
Clrn1Q8K445 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.9□□□□□ -0.66
Clrn1Q8K445 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Gm5369-201ENSMUST00000217499 588 ntBASIC10.9□□□□□ -0.66
Clrn1Q8K445 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.9□□□□□ -0.66
Clrn1Q8K445 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clrn1Q8K445 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.9□□□□□ -0.67
Clrn1Q8K445 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Clrn1Q8K445 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clrn1Q8K445 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.9□□□□□ -0.67
Clrn1Q8K445 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clrn1Q8K445 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clrn1Q8K445 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Gm7851-201ENSMUST00000117574 323 ntBASIC10.89□□□□□ -0.67
Clrn1Q8K445 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.89□□□□□ -0.67
Clrn1Q8K445 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Gm6905-201ENSMUST00000205729 511 ntBASIC10.89□□□□□ -0.67
Clrn1Q8K445 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Gm6867-201ENSMUST00000219165 425 ntBASIC10.89□□□□□ -0.67
Clrn1Q8K445 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.89□□□□□ -0.67
Clrn1Q8K445 Lect2-202ENSMUST00000225183 823 ntBASIC10.89□□□□□ -0.67
Clrn1Q8K445 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Ntng1-201ENSMUST00000051253 327 ntBASIC10.89□□□□□ -0.67
Clrn1Q8K445 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clrn1Q8K445 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms