Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Gm12029-201ENSMUST00000120073 832 ntBASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Gm6485-201ENSMUST00000160676 439 ntBASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Gm37826-201ENSMUST00000195329 322 ntBASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Gm5051-201ENSMUST00000204085 485 ntBASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.45□□□□□ -0.26
Alx1Q8C8B0 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Gm8302-201ENSMUST00000119217 852 ntBASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Gm14460-201ENSMUST00000121511 639 ntBASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.44□□□□□ -0.26
Alx1Q8C8B0 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Alx1Q8C8B0 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Gm24992-201ENSMUST00000157412 130 ntBASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Gm19246-201ENSMUST00000173599 255 ntBASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Gm9353-201ENSMUST00000200472 604 ntBASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.43□□□□□ -0.26
Alx1Q8C8B0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.43□□□□□ -0.26
Alx1Q8C8B0 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms