Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim62Q80V85 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim62Q80V85 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.96□□□□□ -0.49
Trim62Q80V85 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim62Q80V85 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim62Q80V85 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim62Q80V85 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trim62Q80V85 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Trim62Q80V85 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim62Q80V85 Gm11956-201ENSMUST00000119525 512 ntBASIC11.96□□□□□ -0.49
Trim62Q80V85 Gm4726-201ENSMUST00000135604 736 ntBASIC11.96□□□□□ -0.49
Trim62Q80V85 Gm6019-201ENSMUST00000148369 736 ntBASIC11.96□□□□□ -0.49
Trim62Q80V85 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Gm20495-201ENSMUST00000173902 235 ntBASIC11.96□□□□□ -0.49
Trim62Q80V85 Mir3102-201ENSMUST00000175555 104 ntBASIC11.96□□□□□ -0.49
Trim62Q80V85 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.96□□□□□ -0.49
Trim62Q80V85 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Gm43186-201ENSMUST00000198130 824 ntBASIC11.96□□□□□ -0.49
Trim62Q80V85 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim62Q80V85 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim62Q80V85 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.96□□□□□ -0.49
Trim62Q80V85 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim62Q80V85 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trim62Q80V85 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.96□□□□□ -0.5
Trim62Q80V85 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.96□□□□□ -0.5
Trim62Q80V85 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim62Q80V85 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trim62Q80V85 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.96□□□□□ -0.5
Trim62Q80V85 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.96□□□□□ -0.5
Trim62Q80V85 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.96□□□□□ -0.5
Trim62Q80V85 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.95□□□□□ -0.5
Trim62Q80V85 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.95□□□□□ -0.5
Trim62Q80V85 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Gm5996-201ENSMUST00000211110 718 ntBASIC11.95□□□□□ -0.5
Trim62Q80V85 Gm45856-201ENSMUST00000212752 416 ntBASIC11.95□□□□□ -0.5
Trim62Q80V85 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.95□□□□□ -0.5
Trim62Q80V85 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.95□□□□□ -0.5
Trim62Q80V85 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms