Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smchd1Q6P5D8 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Gm44008-201ENSMUST00000204345 412 ntBASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Gm14213-201ENSMUST00000119778 768 ntBASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Gm3329-201ENSMUST00000159873 556 ntBASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Gm43912-201ENSMUST00000204352 538 ntBASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.61□□□□□ -0.39
Smchd1Q6P5D8 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Gm17192-201ENSMUST00000169031 511 ntBASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Gm35960-201ENSMUST00000202712 767 ntBASIC12.6□□□□□ -0.39
Smchd1Q6P5D8 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms