Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm37319-201ENSMUST00000193500 636 ntBASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
ParpbpQ6IRT3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.9□□□□□ -0.67
ParpbpQ6IRT3 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.9□□□□□ -0.67
ParpbpQ6IRT3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
ParpbpQ6IRT3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ParpbpQ6IRT3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ParpbpQ6IRT3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
ParpbpQ6IRT3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ParpbpQ6IRT3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ParpbpQ6IRT3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ParpbpQ6IRT3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ParpbpQ6IRT3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Gm11700-201ENSMUST00000119409 403 ntBASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Gm16505-201ENSMUST00000179981 232 ntBASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Gm9192-201ENSMUST00000183221 985 ntBASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Mir6927-201ENSMUST00000184494 71 ntBASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Erich3-203ENSMUST00000189969 3460 ntBASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ParpbpQ6IRT3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm4909-201ENSMUST00000118749 794 ntBASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm25881-201ENSMUST00000157783 103 ntBASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm38117-201ENSMUST00000194653 939 ntBASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm6991-201ENSMUST00000218475 1178 ntBASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms