Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm4310-201ENSMUST00000177847 889 ntBASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Mir8093-201ENSMUST00000185043 137 ntBASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm9257-201ENSMUST00000221254 232 ntBASIC12.76□□□□□ -0.37
Krt39Q6IFX4 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.76□□□□□ -0.37
Krt39Q6IFX4 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm14071-201ENSMUST00000117817 509 ntBASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm38117-201ENSMUST00000194653 939 ntBASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm6439-201ENSMUST00000199849 862 ntBASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm43966-201ENSMUST00000203301 612 ntBASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm44967-201ENSMUST00000207047 631 ntBASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Krt39Q6IFX4 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm11500-201ENSMUST00000118237 601 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.74□□□□□ -0.37
Krt39Q6IFX4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Krt39Q6IFX4 Gm25890-201ENSMUST00000177643 165 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms