Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Daam2-202ENSMUST00000224595 1926 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm15236-201ENSMUST00000117309 379 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm11793-201ENSMUST00000120433 981 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm13342-201ENSMUST00000121055 207 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm25261-201ENSMUST00000157416 134 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm25927-201ENSMUST00000175058 117 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm37072-201ENSMUST00000194570 837 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm44124-201ENSMUST00000204159 472 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 AC164629.1-201ENSMUST00000220250 1113 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Olfr452-201ENSMUST00000075468 954 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Tpm1-213ENSMUST00000113697 1742 ntTSL 2 BASIC12.42□□□□□ -0.42
Foxd4Q60688 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm42852-201ENSMUST00000202649 1379 ntBASIC12.42□□□□□ -0.42
Foxd4Q60688 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxd4Q60688 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.41□□□□□ -0.42
Foxd4Q60688 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Foxd4Q60688 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Foxd4Q60688 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.41□□□□□ -0.42
Foxd4Q60688 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Foxd4Q60688 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm4986-201ENSMUST00000119731 549 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.41□□□□□ -0.42
Foxd4Q60688 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Foxd4Q60688 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.41□□□□□ -0.42
Foxd4Q60688 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm19086-201ENSMUST00000190772 665 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm37370-201ENSMUST00000191996 1410 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm44137-201ENSMUST00000203670 367 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm6334-201ENSMUST00000207083 228 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.41□□□□□ -0.42
Foxd4Q60688 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC12.41□□□□□ -0.42
Foxd4Q60688 Gm8607-201ENSMUST00000221864 431 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 Cts7-204ENSMUST00000225321 1257 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.41□□□□□ -0.42
Foxd4Q60688 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxd4Q60688 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms