Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
ClpbQ60649 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.12□□□□□ -0.63
ClpbQ60649 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.12□□□□□ -0.63
ClpbQ60649 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
ClpbQ60649 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
ClpbQ60649 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
ClpbQ60649 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.12□□□□□ -0.63
ClpbQ60649 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.11□□□□□ -0.63
ClpbQ60649 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.11□□□□□ -0.63
ClpbQ60649 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 Gm7851-201ENSMUST00000117574 323 ntBASIC11.11□□□□□ -0.63
ClpbQ60649 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 Gm8566-201ENSMUST00000120174 465 ntBASIC11.11□□□□□ -0.63
ClpbQ60649 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.11□□□□□ -0.63
ClpbQ60649 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ClpbQ60649 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ClpbQ60649 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.11□□□□□ -0.63
ClpbQ60649 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.11□□□□□ -0.63
ClpbQ60649 Gm8959-201ENSMUST00000213150 571 ntBASIC11.11□□□□□ -0.63
ClpbQ60649 Gm1821-202ENSMUST00000227415 750 ntBASIC11.11□□□□□ -0.63
ClpbQ60649 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ClpbQ60649 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
ClpbQ60649 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.11□□□□□ -0.63
ClpbQ60649 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
ClpbQ60649 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClpbQ60649 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ClpbQ60649 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.1□□□□□ -0.63
ClpbQ60649 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ClpbQ60649 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
ClpbQ60649 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ClpbQ60649 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.1□□□□□ -0.63
ClpbQ60649 Gm14263-201ENSMUST00000117955 746 ntBASIC11.1□□□□□ -0.63
ClpbQ60649 Gm15004-201ENSMUST00000119192 630 ntBASIC11.1□□□□□ -0.63
ClpbQ60649 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.1□□□□□ -0.63
ClpbQ60649 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
ClpbQ60649 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.1□□□□□ -0.63
ClpbQ60649 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ClpbQ60649 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.1□□□□□ -0.63
ClpbQ60649 Gm38314-201ENSMUST00000195709 625 ntBASIC11.1□□□□□ -0.63
ClpbQ60649 Gm43002-201ENSMUST00000200310 155 ntBASIC11.1□□□□□ -0.63
ClpbQ60649 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.1□□□□□ -0.63
ClpbQ60649 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms