Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Gm23272-201ENSMUST00000104053 129 ntBASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Gm11667-201ENSMUST00000119828 486 ntBASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Gm11246-201ENSMUST00000120880 345 ntBASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.85□□□□□ -0.19
Vps54Q5SPW0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Gm10254-201ENSMUST00000052888 867 ntBASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vps54Q5SPW0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Gm15615-201ENSMUST00000118876 198 ntBASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Gm37905-201ENSMUST00000195310 341 ntBASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Gm44008-201ENSMUST00000204345 412 ntBASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.84□□□□□ -0.19
Vps54Q5SPW0 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.84□□□□□ -0.19
Vps54Q5SPW0 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps54Q5SPW0 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms