Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Gm26989-201ENSMUST00000182608 749 ntBASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Gm43671-201ENSMUST00000200422 433 ntBASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Gm43912-201ENSMUST00000204352 538 ntBASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upf3aQ3ULJ3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Gm5621-201ENSMUST00000187303 640 ntBASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upf3aQ3ULJ3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Gm24791-201ENSMUST00000104284 131 ntBASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Gm20392-201ENSMUST00000173047 701 ntBASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.15□□□□□ -0.46
Upf3aQ3ULJ3 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms