Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC14.48□□□□□ -0.09
Smarcc1P97496 Gm9162-201ENSMUST00000182081 991 ntBASIC14.48□□□□□ -0.09
Smarcc1P97496 Gm26976-201ENSMUST00000182929 908 ntBASIC14.48□□□□□ -0.09
Smarcc1P97496 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC14.48□□□□□ -0.09
Smarcc1P97496 Gm5599-201ENSMUST00000209602 788 ntBASIC14.48□□□□□ -0.09
Smarcc1P97496 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Smarcc1P97496 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.48□□□□□ -0.09
Smarcc1P97496 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.48□□□□□ -0.09
Smarcc1P97496 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcc1P97496 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Smok4a-201ENSMUST00000074512 1455 ntBASIC14.47□□□□□ -0.09
Smarcc1P97496 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm15528-201ENSMUST00000117821 864 ntBASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm11960-201ENSMUST00000122068 925 ntBASIC14.47□□□□□ -0.09
Smarcc1P97496 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm21778-201ENSMUST00000178779 471 ntBASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm44323-201ENSMUST00000198689 129 ntBASIC14.47□□□□□ -0.09
Smarcc1P97496 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm43969-201ENSMUST00000204833 535 ntBASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Gm7525-201ENSMUST00000219425 454 ntBASIC14.47□□□□□ -0.09
Smarcc1P97496 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcc1P97496 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcc1P97496 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Smarcc1P97496 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.46□□□□□ -0.09
Smarcc1P97496 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.46□□□□□ -0.09
Smarcc1P97496 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Smarcc1P97496 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Smarcc1P97496 Gm15374-201ENSMUST00000119313 844 ntBASIC14.46□□□□□ -0.09
Smarcc1P97496 Gm5555-201ENSMUST00000120352 1111 ntBASIC14.46□□□□□ -0.09
Smarcc1P97496 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC14.46□□□□□ -0.09
Smarcc1P97496 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Gm17221-201ENSMUST00000163909 481 ntBASIC14.46□□□□□ -0.09
Smarcc1P97496 Gm17073-201ENSMUST00000168069 556 ntBASIC14.46□□□□□ -0.09
Smarcc1P97496 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC14.46□□□□□ -0.09
Smarcc1P97496 Gm44487-201ENSMUST00000205145 325 ntBASIC14.46□□□□□ -0.09
Smarcc1P97496 Gm45085-201ENSMUST00000209100 441 ntBASIC14.46□□□□□ -0.09
Smarcc1P97496 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC14.46□□□□□ -0.09
Smarcc1P97496 AC134248.1-201ENSMUST00000216113 1176 ntBASIC14.46□□□□□ -0.09
Smarcc1P97496 CT030166.5-201ENSMUST00000222249 420 ntBASIC14.46□□□□□ -0.09
Smarcc1P97496 Gm14005-208ENSMUST00000223654 681 ntBASIC14.46□□□□□ -0.09
Smarcc1P97496 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smarcc1P97496 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcc1P97496 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms