Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.72□□□□□ -0.37
Lig3P97386 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Lig3P97386 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lig3P97386 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Lig3P97386 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lig3P97386 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.71□□□□□ -0.37
Lig3P97386 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lig3P97386 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lig3P97386 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.71□□□□□ -0.37
Lig3P97386 Gm12516-201ENSMUST00000120819 385 ntBASIC12.71□□□□□ -0.37
Lig3P97386 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.71□□□□□ -0.37
Lig3P97386 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.71□□□□□ -0.37
Lig3P97386 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Gm42518-201ENSMUST00000196277 938 ntBASIC12.71□□□□□ -0.37
Lig3P97386 Gm42937-201ENSMUST00000197360 752 ntBASIC12.71□□□□□ -0.37
Lig3P97386 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.71□□□□□ -0.37
Lig3P97386 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Gm19994-201ENSMUST00000217086 586 ntBASIC12.71□□□□□ -0.37
Lig3P97386 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.71□□□□□ -0.37
Lig3P97386 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.71□□□□□ -0.37
Lig3P97386 Gm807-202ENSMUST00000224929 408 ntBASIC12.71□□□□□ -0.37
Lig3P97386 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.71□□□□□ -0.37
Lig3P97386 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.71□□□□□ -0.37
Lig3P97386 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lig3P97386 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.71□□□□□ -0.37
Lig3P97386 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.71□□□□□ -0.37
Lig3P97386 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lig3P97386 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lig3P97386 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Lig3P97386 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.71□□□□□ -0.38
Lig3P97386 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lig3P97386 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Lig3P97386 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lig3P97386 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lig3P97386 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Lig3P97386 BC043934-202ENSMUST00000185694 2356 ntBASIC12.71□□□□□ -0.38
Lig3P97386 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lig3P97386 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Lig3P97386 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lig3P97386 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lig3P97386 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.7□□□□□ -0.38
Lig3P97386 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.7□□□□□ -0.38
Lig3P97386 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lig3P97386 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.7□□□□□ -0.38
Lig3P97386 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 Gm23218-201ENSMUST00000158124 276 ntBASIC12.7□□□□□ -0.38
Lig3P97386 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.7□□□□□ -0.38
Lig3P97386 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Lig3P97386 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.7□□□□□ -0.38
Lig3P97386 Gm19091-201ENSMUST00000208120 978 ntBASIC12.7□□□□□ -0.38
Lig3P97386 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.7□□□□□ -0.38
Lig3P97386 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.7□□□□□ -0.38
Lig3P97386 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.7□□□□□ -0.38
Lig3P97386 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.7□□□□□ -0.38
Lig3P97386 Gm26448-201ENSMUST00000082446 203 ntBASIC12.7□□□□□ -0.38
Lig3P97386 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lig3P97386 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lig3P97386 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.7□□□□□ -0.38
Lig3P97386 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms