Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm14028-201ENSMUST00000117434 479 ntBASIC11.93□□□□□ -0.5
Trim43bP86448 Gm14441-201ENSMUST00000121960 540 ntBASIC11.93□□□□□ -0.5
Trim43bP86448 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim43bP86448 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim43bP86448 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Trim43bP86448 Gm16505-201ENSMUST00000179981 232 ntBASIC11.93□□□□□ -0.5
Trim43bP86448 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.93□□□□□ -0.5
Trim43bP86448 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.93□□□□□ -0.5
Trim43bP86448 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim43bP86448 Gm45433-201ENSMUST00000209386 247 ntBASIC11.93□□□□□ -0.5
Trim43bP86448 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim43bP86448 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim43bP86448 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim43bP86448 Gm8385-201ENSMUST00000058999 643 ntBASIC11.93□□□□□ -0.5
Trim43bP86448 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim43bP86448 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim43bP86448 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.93□□□□□ -0.5
Trim43bP86448 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim43bP86448 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim43bP86448 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim43bP86448 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.92□□□□□ -0.5
Trim43bP86448 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim43bP86448 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim43bP86448 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim43bP86448 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Rps4l-202ENSMUST00000204242 789 ntBASIC11.92□□□□□ -0.5
Trim43bP86448 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim43bP86448 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim43bP86448 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim43bP86448 Gm807-202ENSMUST00000224929 408 ntBASIC11.92□□□□□ -0.5
Trim43bP86448 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim43bP86448 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim43bP86448 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Trim43bP86448 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Trim43bP86448 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43bP86448 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim43bP86448 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trim43bP86448 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim43bP86448 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Trim43bP86448 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.91□□□□□ -0.5
Trim43bP86448 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trim43bP86448 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Trim43bP86448 Gm7857-201ENSMUST00000117957 358 ntBASIC11.91□□□□□ -0.5
Trim43bP86448 Gm11700-201ENSMUST00000119409 403 ntBASIC11.91□□□□□ -0.5
Trim43bP86448 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim43bP86448 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Trim43bP86448 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trim43bP86448 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.91□□□□□ -0.5
Trim43bP86448 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim43bP86448 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim43bP86448 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Gm10254-201ENSMUST00000052888 867 ntBASIC11.91□□□□□ -0.5
Trim43bP86448 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms