Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm24891-201ENSMUST00000104391 136 ntBASIC9.66□□□□□ -0.86
Pdlim4P70271 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm15207-201ENSMUST00000119259 442 ntBASIC9.66□□□□□ -0.86
Pdlim4P70271 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm8100-201ENSMUST00000182906 988 ntBASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm37466-201ENSMUST00000195692 652 ntBASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm2965-201ENSMUST00000198365 343 ntBASIC9.66□□□□□ -0.86
Pdlim4P70271 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.66□□□□□ -0.86
Pdlim4P70271 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.66□□□□□ -0.86
Pdlim4P70271 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.66□□□□□ -0.86
Pdlim4P70271 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Pdlim4P70271 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.65□□□□□ -0.86
Pdlim4P70271 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Gm23200-201ENSMUST00000104379 132 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Pdlim4P70271 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Gm14724-201ENSMUST00000118400 537 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Gm4909-201ENSMUST00000118749 794 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Gm23085-201ENSMUST00000157849 293 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.65□□□□□ -0.86
Pdlim4P70271 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.65□□□□□ -0.86
Pdlim4P70271 Gm38117-201ENSMUST00000194653 939 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.65□□□□□ -0.86
Pdlim4P70271 AU022133-201ENSMUST00000200601 873 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.65□□□□□ -0.86
Pdlim4P70271 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Pdlim4P70271 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pdlim4P70271 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Pdlim4P70271 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.65□□□□□ -0.86
Pdlim4P70271 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms