Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm21115-201ENSMUST00000187565 2578 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm14247-201ENSMUST00000120950 237 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm16479-201ENSMUST00000121706 932 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm18539-201ENSMUST00000204745 1090 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm32111-201ENSMUST00000207689 846 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm5035-201ENSMUST00000215581 927 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm18473-201ENSMUST00000220543 868 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm6888-201ENSMUST00000221983 706 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 AC140397.2-201ENSMUST00000224213 834 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 Rbfox2-208ENSMUST00000227930 1218 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 AC121870.2-201ENSMUST00000214343 1870 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm16478-201ENSMUST00000208113 5084 ntBASIC8.97□□□□□ -0.97
Ctdsp1P58466 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ctdsp1P58466 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Ctdsp1P58466 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ctdsp1P58466 AL645783.1-201ENSMUST00000221416 1832 ntBASIC8.96□□□□□ -0.97
Ctdsp1P58466 Gm10417-201ENSMUST00000194341 3522 ntBASIC8.96□□□□□ -0.97
Ctdsp1P58466 Gm7103-201ENSMUST00000195642 1852 ntBASIC8.96□□□□□ -0.97
Ctdsp1P58466 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Ctdsp1P58466 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ctdsp1P58466 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Ctdsp1P58466 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Gm13123-201ENSMUST00000122173 492 ntBASIC8.96□□□□□ -0.98
Ctdsp1P58466 Gm2231-201ENSMUST00000125661 612 ntBASIC8.96□□□□□ -0.98
Ctdsp1P58466 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 AC160929.1-201ENSMUST00000221247 415 ntBASIC8.96□□□□□ -0.98
Ctdsp1P58466 AC134254.1-201ENSMUST00000221362 167 ntBASIC8.96□□□□□ -0.98
Ctdsp1P58466 Ndufaf2-202ENSMUST00000223734 556 ntBASIC8.96□□□□□ -0.98
Ctdsp1P58466 AC238811.1-201ENSMUST00000225302 441 ntBASIC8.96□□□□□ -0.98
Ctdsp1P58466 AC108416.1-202ENSMUST00000228927 1201 ntBASIC8.96□□□□□ -0.98
Ctdsp1P58466 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
Ctdsp1P58466 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms