Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rrp1P56183 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rrp1P56183 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rrp1P56183 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rrp1P56183 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rrp1P56183 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rrp1P56183 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rrp1P56183 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Rrp1P56183 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rrp1P56183 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rrp1P56183 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rrp1P56183 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Rrp1P56183 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.02□□□□□ -0.32
Rrp1P56183 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rrp1P56183 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.02□□□□□ -0.33
Rrp1P56183 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.02□□□□□ -0.33
Rrp1P56183 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.02□□□□□ -0.33
Rrp1P56183 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.02□□□□□ -0.33
Rrp1P56183 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.02□□□□□ -0.33
Rrp1P56183 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.02□□□□□ -0.33
Rrp1P56183 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rrp1P56183 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rrp1P56183 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rrp1P56183 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.02□□□□□ -0.33
Rrp1P56183 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rrp1P56183 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Rrp1P56183 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rrp1P56183 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rrp1P56183 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rrp1P56183 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rrp1P56183 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.01□□□□□ -0.33
Rrp1P56183 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rrp1P56183 Gm20482-202ENSMUST00000174729 825 ntBASIC13.01□□□□□ -0.33
Rrp1P56183 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.01□□□□□ -0.33
Rrp1P56183 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.01□□□□□ -0.33
Rrp1P56183 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Rrp1P56183 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.01□□□□□ -0.33
Rrp1P56183 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rrp1P56183 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.01□□□□□ -0.33
Rrp1P56183 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.01□□□□□ -0.33
Rrp1P56183 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rrp1P56183 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rrp1P56183 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp1P56183 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rrp1P56183 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rrp1P56183 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rrp1P56183 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rrp1P56183 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp1P56183 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp1P56183 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rrp1P56183 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp1P56183 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Rrp1P56183 Gm18262-201ENSMUST00000222560 1946 ntBASIC13□□□□□ -0.33
Rrp1P56183 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rrp1P56183 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13□□□□□ -0.33
Rrp1P56183 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rrp1P56183 AC159205.5-202ENSMUST00000224849 386 ntBASIC13□□□□□ -0.33
Rrp1P56183 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rrp1P56183 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rrp1P56183 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp1P56183 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp1P56183 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
Rrp1P56183 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp1P56183 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms