Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Gm43966-201ENSMUST00000203301 612 ntBASIC10.85□□□□□ -0.67
CntfP51642 Gm43962-201ENSMUST00000203898 190 ntBASIC10.85□□□□□ -0.67
CntfP51642 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.85□□□□□ -0.67
CntfP51642 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.85□□□□□ -0.67
CntfP51642 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.85□□□□□ -0.67
CntfP51642 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CntfP51642 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
CntfP51642 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.85□□□□□ -0.67
CntfP51642 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CntfP51642 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CntfP51642 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.84□□□□□ -0.67
CntfP51642 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CntfP51642 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CntfP51642 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.84□□□□□ -0.67
CntfP51642 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CntfP51642 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.84□□□□□ -0.67
CntfP51642 Gm44651-201ENSMUST00000207343 372 ntBASIC10.84□□□□□ -0.67
CntfP51642 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Gm18065-201ENSMUST00000221395 526 ntBASIC10.84□□□□□ -0.67
CntfP51642 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.84□□□□□ -0.67
CntfP51642 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.84□□□□□ -0.67
CntfP51642 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CntfP51642 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.84□□□□□ -0.67
CntfP51642 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CntfP51642 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CntfP51642 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
CntfP51642 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CntfP51642 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CntfP51642 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.83□□□□□ -0.68
CntfP51642 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CntfP51642 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms