Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Erich3-203ENSMUST00000189969 3460 ntBASIC11.7□□□□□ -0.54
Lhx3P50481 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Lhx3P50481 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.69□□□□□ -0.54
Lhx3P50481 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.69□□□□□ -0.54
Lhx3P50481 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lhx3P50481 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.69□□□□□ -0.54
Lhx3P50481 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Lhx3P50481 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.69□□□□□ -0.54
Lhx3P50481 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.69□□□□□ -0.54
Lhx3P50481 Gm14395-201ENSMUST00000120494 563 ntBASIC11.69□□□□□ -0.54
Lhx3P50481 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.69□□□□□ -0.54
Lhx3P50481 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Olfml3-204ENSMUST00000169286 874 ntBASIC11.69□□□□□ -0.54
Lhx3P50481 Gm21778-201ENSMUST00000178779 471 ntBASIC11.69□□□□□ -0.54
Lhx3P50481 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Gm7467-201ENSMUST00000185173 652 ntBASIC11.69□□□□□ -0.54
Lhx3P50481 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.69□□□□□ -0.54
Lhx3P50481 Gm37905-201ENSMUST00000195310 341 ntBASIC11.69□□□□□ -0.54
Lhx3P50481 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.69□□□□□ -0.54
Lhx3P50481 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.69□□□□□ -0.54
Lhx3P50481 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.69□□□□□ -0.54
Lhx3P50481 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lhx3P50481 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.69□□□□□ -0.54
Lhx3P50481 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.69□□□□□ -0.54
Lhx3P50481 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.69□□□□□ -0.54
Lhx3P50481 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lhx3P50481 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lhx3P50481 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.68□□□□□ -0.54
Lhx3P50481 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lhx3P50481 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.68□□□□□ -0.54
Lhx3P50481 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lhx3P50481 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Lhx3P50481 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lhx3P50481 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lhx3P50481 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lhx3P50481 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Gm8111-201ENSMUST00000117659 987 ntBASIC11.68□□□□□ -0.54
Lhx3P50481 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.68□□□□□ -0.54
Lhx3P50481 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lhx3P50481 Gm23694-201ENSMUST00000179335 110 ntBASIC11.68□□□□□ -0.54
Lhx3P50481 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.68□□□□□ -0.54
Lhx3P50481 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.68□□□□□ -0.54
Lhx3P50481 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.68□□□□□ -0.54
Lhx3P50481 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lhx3P50481 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lhx3P50481 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx3P50481 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms