Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
HttP42859 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
HttP42859 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HttP42859 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC11.89□□□□□ -0.51
HttP42859 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HttP42859 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC11.89□□□□□ -0.51
HttP42859 Mir8111-201ENSMUST00000184463 137 ntBASIC11.89□□□□□ -0.51
HttP42859 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC11.89□□□□□ -0.51
HttP42859 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HttP42859 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HttP42859 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HttP42859 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HttP42859 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
HttP42859 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC11.89□□□□□ -0.51
HttP42859 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.89□□□□□ -0.51
HttP42859 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HttP42859 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
HttP42859 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Gm7210-201ENSMUST00000209309 1067 ntBASIC11.89□□□□□ -0.51
HttP42859 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HttP42859 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.88□□□□□ -0.51
HttP42859 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC11.88□□□□□ -0.51
HttP42859 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Gm10537-201ENSMUST00000192625 1698 ntBASIC11.88□□□□□ -0.51
HttP42859 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
HttP42859 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.88□□□□□ -0.51
HttP42859 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
HttP42859 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
HttP42859 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC11.88□□□□□ -0.51
HttP42859 Gm6517-201ENSMUST00000121056 511 ntBASIC11.88□□□□□ -0.51
HttP42859 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Gm22994-201ENSMUST00000175422 82 ntBASIC11.88□□□□□ -0.51
HttP42859 Gm3052-201ENSMUST00000186409 829 ntBASIC11.88□□□□□ -0.51
HttP42859 Gm44460-201ENSMUST00000196179 129 ntBASIC11.88□□□□□ -0.51
HttP42859 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.88□□□□□ -0.51
HttP42859 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Gm14021-201ENSMUST00000117683 961 ntBASIC11.88□□□□□ -0.51
HttP42859 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC11.88□□□□□ -0.51
HttP42859 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.88□□□□□ -0.51
HttP42859 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC11.88□□□□□ -0.51
HttP42859 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC11.88□□□□□ -0.51
HttP42859 Gm8960-201ENSMUST00000219787 788 ntBASIC11.88□□□□□ -0.51
HttP42859 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.88□□□□□ -0.51
HttP42859 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HttP42859 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HttP42859 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.87□□□□□ -0.51
HttP42859 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HttP42859 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.87□□□□□ -0.51
HttP42859 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC11.87□□□□□ -0.51
HttP42859 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms