Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm18065-201ENSMUST00000221395 526 ntBASIC11.19□□□□□ -0.62
TfamP40630 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.19□□□□□ -0.62
TfamP40630 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
TfamP40630 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.19□□□□□ -0.62
TfamP40630 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
TfamP40630 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.18□□□□□ -0.62
TfamP40630 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TfamP40630 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.18□□□□□ -0.62
TfamP40630 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TfamP40630 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.18□□□□□ -0.62
TfamP40630 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.18□□□□□ -0.62
TfamP40630 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TfamP40630 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TfamP40630 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TfamP40630 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TfamP40630 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.18□□□□□ -0.62
TfamP40630 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Gm27320-201ENSMUST00000184892 109 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm29615-201ENSMUST00000185371 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm28224-201ENSMUST00000186078 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm29001-201ENSMUST00000186177 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm28292-201ENSMUST00000186593 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm28101-201ENSMUST00000187608 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm29076-201ENSMUST00000187689 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm28302-201ENSMUST00000187931 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm28646-201ENSMUST00000188220 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm28205-201ENSMUST00000189177 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm29032-201ENSMUST00000189797 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.18□□□□□ -0.62
TfamP40630 Gm28695-201ENSMUST00000190300 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm37448-201ENSMUST00000192795 697 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm37259-201ENSMUST00000193903 849 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm38117-201ENSMUST00000194653 939 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm43184-201ENSMUST00000197247 542 ntBASIC11.18□□□□□ -0.62
TfamP40630 AY036118-201ENSMUST00000200021 923 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm7783-201ENSMUST00000204795 781 ntBASIC11.18□□□□□ -0.62
TfamP40630 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.18□□□□□ -0.62
TfamP40630 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
TfamP40630 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.18□□□□□ -0.62
TfamP40630 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
TfamP40630 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TfamP40630 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.18□□□□□ -0.62
TfamP40630 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
TfamP40630 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.18□□□□□ -0.62
TfamP40630 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
TfamP40630 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.18□□□□□ -0.62
TfamP40630 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TfamP40630 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TfamP40630 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TfamP40630 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TfamP40630 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TfamP40630 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.17□□□□□ -0.62
TfamP40630 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TfamP40630 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TfamP40630 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
TfamP40630 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TfamP40630 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TfamP40630 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms