Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.89□□□□□ -0.51
Cxcl12P40224 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.89□□□□□ -0.51
Cxcl12P40224 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.89□□□□□ -0.51
Cxcl12P40224 Id2-203ENSMUST00000222667 958 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cxcl12P40224 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cxcl12P40224 Gm10580-201ENSMUST00000097985 396 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 Gm10582-201ENSMUST00000097987 396 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 Gm10583-201ENSMUST00000097988 396 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cxcl12P40224 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cxcl12P40224 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cxcl12P40224 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Gm13286-201ENSMUST00000117750 537 ntBASIC11.88□□□□□ -0.51
Cxcl12P40224 Gm13284-201ENSMUST00000121020 547 ntBASIC11.88□□□□□ -0.51
Cxcl12P40224 Gm16305-201ENSMUST00000140747 556 ntBASIC11.88□□□□□ -0.51
Cxcl12P40224 Gm2345-201ENSMUST00000193451 589 ntBASIC11.88□□□□□ -0.51
Cxcl12P40224 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.88□□□□□ -0.51
Cxcl12P40224 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.88□□□□□ -0.51
Cxcl12P40224 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.88□□□□□ -0.51
Cxcl12P40224 Gm5178-201ENSMUST00000219380 898 ntBASIC11.88□□□□□ -0.51
Cxcl12P40224 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.88□□□□□ -0.51
Cxcl12P40224 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cxcl12P40224 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cxcl12P40224 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cxcl12P40224 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cxcl12P40224 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.88□□□□□ -0.51
Cxcl12P40224 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.88□□□□□ -0.51
Cxcl12P40224 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cxcl12P40224 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.87□□□□□ -0.51
Cxcl12P40224 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.87□□□□□ -0.51
Cxcl12P40224 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cxcl12P40224 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.87□□□□□ -0.51
Cxcl12P40224 Gm4943-201ENSMUST00000132879 424 ntBASIC11.87□□□□□ -0.51
Cxcl12P40224 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms