Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Rab5cP35278 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.4□□□□□ -0.9
Rab5cP35278 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab5cP35278 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Rab5cP35278 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Rab5cP35278 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab5cP35278 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab5cP35278 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Rab5cP35278 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rab5cP35278 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Rab5cP35278 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Rab5cP35278 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rab5cP35278 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Rab5cP35278 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.39□□□□□ -0.91
Rab5cP35278 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.39□□□□□ -0.91
Rab5cP35278 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rab5cP35278 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm12463-201ENSMUST00000118271 849 ntBASIC9.39□□□□□ -0.91
Rab5cP35278 Gm12341-201ENSMUST00000119724 503 ntBASIC9.39□□□□□ -0.91
Rab5cP35278 Gm15487-201ENSMUST00000122373 465 ntBASIC9.39□□□□□ -0.91
Rab5cP35278 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC9.39□□□□□ -0.91
Rab5cP35278 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm8000-201ENSMUST00000188378 592 ntBASIC9.39□□□□□ -0.91
Rab5cP35278 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm19163-201ENSMUST00000223313 780 ntBASIC9.39□□□□□ -0.91
Rab5cP35278 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.39□□□□□ -0.91
Rab5cP35278 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rab5cP35278 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.39□□□□□ -0.91
Rab5cP35278 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rab5cP35278 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rab5cP35278 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Rab5cP35278 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rab5cP35278 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.39□□□□□ -0.91
Rab5cP35278 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab5cP35278 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rab5cP35278 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.38□□□□□ -0.91
Rab5cP35278 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Rab5cP35278 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.38□□□□□ -0.91
Rab5cP35278 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rab5cP35278 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.38□□□□□ -0.91
Rab5cP35278 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Rab5cP35278 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rab5cP35278 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 Gm13223-201ENSMUST00000118609 747 ntBASIC9.38□□□□□ -0.91
Rab5cP35278 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Rab5cP35278 Gm11960-201ENSMUST00000122068 925 ntBASIC9.38□□□□□ -0.91
Rab5cP35278 Gm24694-201ENSMUST00000180054 110 ntBASIC9.38□□□□□ -0.91
Rab5cP35278 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rab5cP35278 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC9.38□□□□□ -0.91
Rab5cP35278 Gm27663-201ENSMUST00000184839 110 ntBASIC9.38□□□□□ -0.91
Rab5cP35278 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.38□□□□□ -0.91
Rab5cP35278 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.38□□□□□ -0.91
Rab5cP35278 Gm43966-201ENSMUST00000203301 612 ntBASIC9.38□□□□□ -0.91
Rab5cP35278 Gm45925-201ENSMUST00000218882 744 ntBASIC9.38□□□□□ -0.91
Rab5cP35278 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms