Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm26047-201ENSMUST00000157308 113 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6bP23440 Gm18367-201ENSMUST00000176139 600 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Gm38151-201ENSMUST00000195085 289 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Gm37905-201ENSMUST00000195310 341 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Gm26047-202ENSMUST00000198840 115 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.7□□□□□ -0.38
Pde6bP23440 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6bP23440 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Thoc7-209ENSMUST00000225325 765 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pde6bP23440 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pde6bP23440 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pde6bP23440 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pde6bP23440 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Pde6bP23440 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.7□□□□□ -0.38
Pde6bP23440 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.7□□□□□ -0.38
Pde6bP23440 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pde6bP23440 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.69□□□□□ -0.38
Pde6bP23440 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.69□□□□□ -0.38
Pde6bP23440 Gm12899-201ENSMUST00000120565 551 ntBASIC12.69□□□□□ -0.38
Pde6bP23440 Gm7150-201ENSMUST00000122032 981 ntBASIC12.69□□□□□ -0.38
Pde6bP23440 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.69□□□□□ -0.38
Pde6bP23440 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Pde6bP23440 Gm10731-201ENSMUST00000181171 448 ntBASIC12.69□□□□□ -0.38
Pde6bP23440 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Pde6bP23440 Gm44329-201ENSMUST00000197469 112 ntBASIC12.69□□□□□ -0.38
Pde6bP23440 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.69□□□□□ -0.38
Pde6bP23440 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.69□□□□□ -0.38
Pde6bP23440 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pde6bP23440 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.69□□□□□ -0.38
Pde6bP23440 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.69□□□□□ -0.38
Pde6bP23440 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pde6bP23440 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6bP23440 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.69□□□□□ -0.38
Pde6bP23440 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Pde6bP23440 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.68□□□□□ -0.38
Pde6bP23440 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pde6bP23440 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.68□□□□□ -0.38
Pde6bP23440 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pde6bP23440 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.68□□□□□ -0.38
Pde6bP23440 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.68□□□□□ -0.38
Pde6bP23440 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.68□□□□□ -0.38
Pde6bP23440 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6bP23440 Gm25076-201ENSMUST00000104098 132 ntBASIC12.68□□□□□ -0.38
Pde6bP23440 Gm26013-201ENSMUST00000104404 119 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms