Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Clk1P22518 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clk1P22518 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clk1P22518 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clk1P22518 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clk1P22518 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Clk1P22518 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clk1P22518 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Clk1P22518 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.89□□□□□ -0.67
Clk1P22518 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.89□□□□□ -0.67
Clk1P22518 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Clk1P22518 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Clk1P22518 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Clk1P22518 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Clk1P22518 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Gm22133-201ENSMUST00000102082 109 ntBASIC10.89□□□□□ -0.67
Clk1P22518 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Clk1P22518 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Clk1P22518 Gm14130-201ENSMUST00000118417 987 ntBASIC10.89□□□□□ -0.67
Clk1P22518 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.89□□□□□ -0.67
Clk1P22518 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.89□□□□□ -0.67
Clk1P22518 Gm7722-201ENSMUST00000120646 741 ntBASIC10.89□□□□□ -0.67
Clk1P22518 Gm11660-201ENSMUST00000120955 412 ntBASIC10.89□□□□□ -0.67
Clk1P22518 Gm12164-201ENSMUST00000121695 551 ntBASIC10.89□□□□□ -0.67
Clk1P22518 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Clk1P22518 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.89□□□□□ -0.67
Clk1P22518 Gm18893-201ENSMUST00000198416 943 ntBASIC10.89□□□□□ -0.67
Clk1P22518 AY036118-201ENSMUST00000200021 923 ntBASIC10.89□□□□□ -0.67
Clk1P22518 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Clk1P22518 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.89□□□□□ -0.67
Clk1P22518 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Clk1P22518 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Clk1P22518 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Clk1P22518 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Clk1P22518 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.89□□□□□ -0.67
Clk1P22518 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.89□□□□□ -0.67
Clk1P22518 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.89□□□□□ -0.67
Clk1P22518 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Clk1P22518 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clk1P22518 Gm7340-201ENSMUST00000119729 2752 ntBASIC10.88□□□□□ -0.67
Clk1P22518 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.88□□□□□ -0.67
Clk1P22518 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.88□□□□□ -0.67
Clk1P22518 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.88□□□□□ -0.67
Clk1P22518 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.88□□□□□ -0.67
Clk1P22518 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.88□□□□□ -0.67
Clk1P22518 Gm6082-201ENSMUST00000215204 454 ntBASIC10.88□□□□□ -0.67
Clk1P22518 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Clk1P22518 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.88□□□□□ -0.67
Clk1P22518 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Clk1P22518 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clk1P22518 Gm37040-201ENSMUST00000191740 1824 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms