Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ccl3P10855 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ccl3P10855 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.19□□□□□ -0.78
Ccl3P10855 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.19□□□□□ -0.78
Ccl3P10855 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.19□□□□□ -0.78
Ccl3P10855 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ccl3P10855 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.19□□□□□ -0.78
Ccl3P10855 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm12663-201ENSMUST00000118481 958 ntBASIC10.19□□□□□ -0.78
Ccl3P10855 Gm14497-201ENSMUST00000119537 580 ntBASIC10.19□□□□□ -0.78
Ccl3P10855 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccl3P10855 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm29067-201ENSMUST00000190821 470 ntBASIC10.19□□□□□ -0.78
Ccl3P10855 Gm37365-201ENSMUST00000193109 409 ntBASIC10.19□□□□□ -0.78
Ccl3P10855 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm2594-201ENSMUST00000214774 742 ntBASIC10.19□□□□□ -0.78
Ccl3P10855 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.19□□□□□ -0.78
Ccl3P10855 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Ccl3P10855 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Ccl3P10855 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccl3P10855 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.19□□□□□ -0.78
Ccl3P10855 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ccl3P10855 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccl3P10855 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ccl3P10855 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Gm25148-201ENSMUST00000104611 123 ntBASIC10.18□□□□□ -0.78
Ccl3P10855 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.18□□□□□ -0.78
Ccl3P10855 Gm12943-201ENSMUST00000119616 210 ntBASIC10.18□□□□□ -0.78
Ccl3P10855 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ccl3P10855 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.18□□□□□ -0.78
Ccl3P10855 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.18□□□□□ -0.78
Ccl3P10855 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccl3P10855 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccl3P10855 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccl3P10855 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccl3P10855 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccl3P10855 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccl3P10855 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccl3P10855 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.18□□□□□ -0.78
Ccl3P10855 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.18□□□□□ -0.78
Ccl3P10855 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccl3P10855 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccl3P10855 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Ccl3P10855 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.18□□□□□ -0.78
Ccl3P10855 Gm45856-201ENSMUST00000212752 416 ntBASIC10.18□□□□□ -0.78
Ccl3P10855 Gm26670-202ENSMUST00000226862 340 ntBASIC10.18□□□□□ -0.78
Ccl3P10855 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.18□□□□□ -0.78
Ccl3P10855 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccl3P10855 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl3P10855 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ccl3P10855 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms