Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.94□□□□□ -0.66
ApoeP08226 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.94□□□□□ -0.66
ApoeP08226 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.94□□□□□ -0.66
ApoeP08226 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
ApoeP08226 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
ApoeP08226 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.94□□□□□ -0.66
ApoeP08226 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
ApoeP08226 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.94□□□□□ -0.66
ApoeP08226 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.94□□□□□ -0.66
ApoeP08226 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
ApoeP08226 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Gm15004-201ENSMUST00000119192 630 ntBASIC10.93□□□□□ -0.66
ApoeP08226 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.93□□□□□ -0.66
ApoeP08226 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Gm3329-201ENSMUST00000159873 556 ntBASIC10.93□□□□□ -0.66
ApoeP08226 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.93□□□□□ -0.66
ApoeP08226 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.93□□□□□ -0.66
ApoeP08226 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Gm4607-201ENSMUST00000206649 577 ntBASIC10.93□□□□□ -0.66
ApoeP08226 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.93□□□□□ -0.66
ApoeP08226 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
ApoeP08226 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
ApoeP08226 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
ApoeP08226 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.93□□□□□ -0.66
ApoeP08226 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.93□□□□□ -0.66
ApoeP08226 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
ApoeP08226 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.93□□□□□ -0.66
ApoeP08226 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ApoeP08226 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
ApoeP08226 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ApoeP08226 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
ApoeP08226 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms