Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.85□□□□□ -0.19
Ube4aE9Q735 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.85□□□□□ -0.19
Ube4aE9Q735 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.85□□□□□ -0.19
Ube4aE9Q735 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Gm11560-201ENSMUST00000117567 948 ntBASIC13.85□□□□□ -0.19
Ube4aE9Q735 Gm11801-201ENSMUST00000117807 746 ntBASIC13.85□□□□□ -0.19
Ube4aE9Q735 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Gm17192-201ENSMUST00000169031 511 ntBASIC13.85□□□□□ -0.19
Ube4aE9Q735 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.85□□□□□ -0.19
Ube4aE9Q735 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.85□□□□□ -0.19
Ube4aE9Q735 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.85□□□□□ -0.19
Ube4aE9Q735 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.85□□□□□ -0.19
Ube4aE9Q735 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.85□□□□□ -0.19
Ube4aE9Q735 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.85□□□□□ -0.19
Ube4aE9Q735 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Mir483-201ENSMUST00000093631 73 ntBASIC13.85□□□□□ -0.19
Ube4aE9Q735 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4aE9Q735 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.84□□□□□ -0.19
Ube4aE9Q735 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Mir453-201ENSMUST00000104732 82 ntBASIC13.84□□□□□ -0.19
Ube4aE9Q735 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Gm13284-201ENSMUST00000121020 547 ntBASIC13.84□□□□□ -0.19
Ube4aE9Q735 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.84□□□□□ -0.19
Ube4aE9Q735 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Gm16030-201ENSMUST00000159098 603 ntBASIC13.84□□□□□ -0.19
Ube4aE9Q735 Gm19246-201ENSMUST00000173599 255 ntBASIC13.84□□□□□ -0.19
Ube4aE9Q735 Gm25951-201ENSMUST00000175330 64 ntBASIC13.84□□□□□ -0.19
Ube4aE9Q735 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.84□□□□□ -0.19
Ube4aE9Q735 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4aE9Q735 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ube4aE9Q735 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.83□□□□□ -0.2
Ube4aE9Q735 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Gm13351-201ENSMUST00000118087 414 ntBASIC13.83□□□□□ -0.2
Ube4aE9Q735 Gm15617-201ENSMUST00000118973 771 ntBASIC13.83□□□□□ -0.2
Ube4aE9Q735 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.83□□□□□ -0.2
Ube4aE9Q735 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4aE9Q735 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Gm9369-201ENSMUST00000196009 733 ntBASIC13.83□□□□□ -0.2
Ube4aE9Q735 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.83□□□□□ -0.2
Ube4aE9Q735 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.83□□□□□ -0.2
Ube4aE9Q735 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.83□□□□□ -0.2
Ube4aE9Q735 Gm9111-201ENSMUST00000219394 709 ntBASIC13.83□□□□□ -0.2
Ube4aE9Q735 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms