Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Mir8091-201ENSMUST00000183602 139 ntBASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Gm2345-201ENSMUST00000193451 589 ntBASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.68□□□□□ -0.54
Col4a6B1AVK5 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Gm23439-201ENSMUST00000104292 132 ntBASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Gm23604-201ENSMUST00000104311 132 ntBASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Mir1893-201ENSMUST00000122565 83 ntBASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col4a6B1AVK5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Gm7928-201ENSMUST00000181249 701 ntBASIC11.67□□□□□ -0.54
Col4a6B1AVK5 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Gm6794-201ENSMUST00000203829 457 ntBASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Gm33080-201ENSMUST00000205429 172 ntBASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.67□□□□□ -0.54
Col4a6B1AVK5 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Gm3283-201ENSMUST00000199319 1350 ntBASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Col4a6B1AVK5 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms