Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Snord23-201ENSMUST00000116828 109 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm9133-201ENSMUST00000118289 540 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm24809-201ENSMUST00000175318 271 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm4604-201ENSMUST00000025040 390 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm8325-201ENSMUST00000099086 453 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Snord17-201ENSMUST00000104526 238 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm11980-201ENSMUST00000121445 986 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm13445-201ENSMUST00000121664 307 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm25343-201ENSMUST00000157460 107 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm25580-201ENSMUST00000083409 327 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Scn3aA2ASI5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn3aA2ASI5 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn3aA2ASI5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn3aA2ASI5 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn3aA2ASI5 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.77□□□□□ -0.36
Scn3aA2ASI5 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.77□□□□□ -0.36
Scn3aA2ASI5 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Scn3aA2ASI5 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Scn3aA2ASI5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn3aA2ASI5 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn3aA2ASI5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.77□□□□□ -0.36
Scn3aA2ASI5 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Gm18035-201ENSMUST00000211962 589 ntBASIC12.77□□□□□ -0.37
Scn3aA2ASI5 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Gm9111-201ENSMUST00000219394 709 ntBASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn3aA2ASI5 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Mir453-201ENSMUST00000104732 82 ntBASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Gm19927-201ENSMUST00000185792 781 ntBASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Gm44216-201ENSMUST00000203942 157 ntBASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn3aA2ASI5 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms