Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubd1Q9R1K7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubd1Q9R1K7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubd1Q9R1K7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubd1Q9R1K7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.96■□□□□ 0.95
Tubd1Q9R1K7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubd1Q9R1K7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubd1Q9R1K7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tubd1Q9R1K7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.95■□□□□ 0.94
Tubd1Q9R1K7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubd1Q9R1K7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.95■□□□□ 0.94
Tubd1Q9R1K7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubd1Q9R1K7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Tubd1Q9R1K7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubd1Q9R1K7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Tubd1Q9R1K7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubd1Q9R1K7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubd1Q9R1K7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubd1Q9R1K7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.94■□□□□ 0.94
Tubd1Q9R1K7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubd1Q9R1K7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tubd1Q9R1K7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubd1Q9R1K7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubd1Q9R1K7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Tubd1Q9R1K7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubd1Q9R1K7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Tubd1Q9R1K7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubd1Q9R1K7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tubd1Q9R1K7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.91■□□□□ 0.94
Tubd1Q9R1K7 Gm43530-201ENSMUST00000195920 274 ntBASIC20.91■□□□□ 0.94
Tubd1Q9R1K7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tubd1Q9R1K7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.91■□□□□ 0.94
Tubd1Q9R1K7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubd1Q9R1K7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubd1Q9R1K7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Tubd1Q9R1K7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Tubd1Q9R1K7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubd1Q9R1K7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubd1Q9R1K7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tubd1Q9R1K7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.9■□□□□ 0.94
Tubd1Q9R1K7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.9■□□□□ 0.94
Tubd1Q9R1K7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubd1Q9R1K7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tubd1Q9R1K7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubd1Q9R1K7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tubd1Q9R1K7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tubd1Q9R1K7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.89■□□□□ 0.94
Tubd1Q9R1K7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tubd1Q9R1K7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubd1Q9R1K7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubd1Q9R1K7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tubd1Q9R1K7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubd1Q9R1K7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubd1Q9R1K7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Tubd1Q9R1K7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tubd1Q9R1K7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubd1Q9R1K7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Tubd1Q9R1K7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubd1Q9R1K7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.87■□□□□ 0.93
Tubd1Q9R1K7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubd1Q9R1K7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Tubd1Q9R1K7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tubd1Q9R1K7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tubd1Q9R1K7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tubd1Q9R1K7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tubd1Q9R1K7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubd1Q9R1K7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Tubd1Q9R1K7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.86■□□□□ 0.93
Tubd1Q9R1K7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.86■□□□□ 0.93
Tubd1Q9R1K7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubd1Q9R1K7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubd1Q9R1K7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.86■□□□□ 0.93
Tubd1Q9R1K7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Tubd1Q9R1K7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tubd1Q9R1K7 Gm12922-201ENSMUST00000120626 809 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms