Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nubp1Q9R060 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.8■□□□□ 0.44
Nubp1Q9R060 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nubp1Q9R060 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nubp1Q9R060 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nubp1Q9R060 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nubp1Q9R060 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nubp1Q9R060 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.79■□□□□ 0.44
Nubp1Q9R060 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nubp1Q9R060 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.79■□□□□ 0.44
Nubp1Q9R060 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nubp1Q9R060 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.79■□□□□ 0.44
Nubp1Q9R060 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nubp1Q9R060 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nubp1Q9R060 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nubp1Q9R060 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nubp1Q9R060 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nubp1Q9R060 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nubp1Q9R060 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Nubp1Q9R060 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nubp1Q9R060 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nubp1Q9R060 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nubp1Q9R060 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nubp1Q9R060 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Nubp1Q9R060 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.77■□□□□ 0.44
Nubp1Q9R060 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nubp1Q9R060 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.77■□□□□ 0.44
Nubp1Q9R060 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nubp1Q9R060 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nubp1Q9R060 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nubp1Q9R060 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nubp1Q9R060 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nubp1Q9R060 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Nubp1Q9R060 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nubp1Q9R060 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nubp1Q9R060 Gm27011-201ENSMUST00000182352 972 ntBASIC17.76■□□□□ 0.43
Nubp1Q9R060 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nubp1Q9R060 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nubp1Q9R060 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Gm7143-201ENSMUST00000222811 859 ntBASIC17.75■□□□□ 0.43
Nubp1Q9R060 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nubp1Q9R060 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nubp1Q9R060 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Nubp1Q9R060 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.74■□□□□ 0.43
Nubp1Q9R060 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nubp1Q9R060 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nubp1Q9R060 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nubp1Q9R060 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nubp1Q9R060 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nubp1Q9R060 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nubp1Q9R060 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nubp1Q9R060 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nubp1Q9R060 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.73■□□□□ 0.43
Nubp1Q9R060 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nubp1Q9R060 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nubp1Q9R060 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nubp1Q9R060 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nubp1Q9R060 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.72■□□□□ 0.43
Nubp1Q9R060 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Spcs1-204ENSMUST00000226782 949 ntBASIC17.72■□□□□ 0.43
Nubp1Q9R060 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nubp1Q9R060 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nubp1Q9R060 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Nubp1Q9R060 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nubp1Q9R060 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Nubp1Q9R060 Gm18671-201ENSMUST00000214826 683 ntBASIC17.71■□□□□ 0.43
Nubp1Q9R060 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nubp1Q9R060 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nubp1Q9R060 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nubp1Q9R060 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nubp1Q9R060 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Nubp1Q9R060 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nubp1Q9R060 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nubp1Q9R060 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nubp1Q9R060 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nubp1Q9R060 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nubp1Q9R060 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nubp1Q9R060 Gm12251-201ENSMUST00000117893 792 ntBASIC17.7■□□□□ 0.42
Nubp1Q9R060 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms