Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rita1Q9D1H0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rita1Q9D1H0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rita1Q9D1H0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rita1Q9D1H0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rita1Q9D1H0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rita1Q9D1H0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rita1Q9D1H0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rita1Q9D1H0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rita1Q9D1H0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rita1Q9D1H0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rita1Q9D1H0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rita1Q9D1H0 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.89■□□□□ 0.61
Rita1Q9D1H0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Rita1Q9D1H0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.89■□□□□ 0.61
Rita1Q9D1H0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rita1Q9D1H0 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.88■□□□□ 0.61
Rita1Q9D1H0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Rita1Q9D1H0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rita1Q9D1H0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rita1Q9D1H0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rita1Q9D1H0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rita1Q9D1H0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rita1Q9D1H0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rita1Q9D1H0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rita1Q9D1H0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rita1Q9D1H0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.87■□□□□ 0.61
Rita1Q9D1H0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.87■□□□□ 0.61
Rita1Q9D1H0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rita1Q9D1H0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rita1Q9D1H0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rita1Q9D1H0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rita1Q9D1H0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rita1Q9D1H0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rita1Q9D1H0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rita1Q9D1H0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rita1Q9D1H0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.86■□□□□ 0.61
Rita1Q9D1H0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rita1Q9D1H0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rita1Q9D1H0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rita1Q9D1H0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rita1Q9D1H0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rita1Q9D1H0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rita1Q9D1H0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rita1Q9D1H0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rita1Q9D1H0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rita1Q9D1H0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rita1Q9D1H0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rita1Q9D1H0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rita1Q9D1H0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.84■□□□□ 0.61
Rita1Q9D1H0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.84■□□□□ 0.61
Rita1Q9D1H0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rita1Q9D1H0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rita1Q9D1H0 Gm27454-201ENSMUST00000185090 204 ntBASIC18.84■□□□□ 0.61
Rita1Q9D1H0 Gm43530-201ENSMUST00000195920 274 ntBASIC18.84■□□□□ 0.61
Rita1Q9D1H0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rita1Q9D1H0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rita1Q9D1H0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rita1Q9D1H0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rita1Q9D1H0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rita1Q9D1H0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rita1Q9D1H0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rita1Q9D1H0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rita1Q9D1H0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rita1Q9D1H0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rita1Q9D1H0 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.82■□□□□ 0.6
Rita1Q9D1H0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.82■□□□□ 0.6
Rita1Q9D1H0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.82■□□□□ 0.6
Rita1Q9D1H0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rita1Q9D1H0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rita1Q9D1H0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rita1Q9D1H0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Rita1Q9D1H0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rita1Q9D1H0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rita1Q9D1H0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rita1Q9D1H0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rita1Q9D1H0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rita1Q9D1H0 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.81■□□□□ 0.6
Rita1Q9D1H0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rita1Q9D1H0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rita1Q9D1H0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rita1Q9D1H0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rita1Q9D1H0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rita1Q9D1H0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rita1Q9D1H0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rita1Q9D1H0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rita1Q9D1H0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.8■□□□□ 0.6
Rita1Q9D1H0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms