Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9CR55 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9CR55 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9CR55 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9CR55 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Q9CR55 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Q9CR55 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q9CR55 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Q9CR55 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q9CR55 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q9CR55 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Q9CR55 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Q9CR55 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q9CR55 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q9CR55 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q9CR55 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Q9CR55 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q9CR55 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q9CR55 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.73■□□□□ 0.59
Q9CR55 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Q9CR55 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CR55 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CR55 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CR55 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.72■□□□□ 0.59
Q9CR55 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Q9CR55 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CR55 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CR55 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CR55 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CR55 Gm11175-201ENSMUST00000116172 543 ntBASIC18.72■□□□□ 0.59
Q9CR55 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CR55 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CR55 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Q9CR55 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9CR55 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q9CR55 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q9CR55 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Q9CR55 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Q9CR55 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Q9CR55 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q9CR55 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q9CR55 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q9CR55 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q9CR55 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.71■□□□□ 0.59
Q9CR55 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CR55 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CR55 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CR55 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.7■□□□□ 0.58
Q9CR55 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CR55 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CR55 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CR55 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CR55 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CR55 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CR55 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Q9CR55 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Q9CR55 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Q9CR55 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9CR55 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Q9CR55 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q9CR55 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q9CR55 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Q9CR55 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Q9CR55 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q9CR55 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Q9CR55 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q9CR55 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.69■□□□□ 0.58
Q9CR55 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Q9CR55 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.68■□□□□ 0.58
Q9CR55 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9CR55 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9CR55 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Q9CR55 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.68■□□□□ 0.58
Q9CR55 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9CR55 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9CR55 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9CR55 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.68■□□□□ 0.58
Q9CR55 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.68■□□□□ 0.58
Q9CR55 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CR55 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.67■□□□□ 0.58
Q9CR55 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CR55 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Q9CR55 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Q9CR55 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CR55 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CR55 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.67■□□□□ 0.58
Q9CR55 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CR55 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CR55 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CR55 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Q9CR55 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CR55 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.67■□□□□ 0.58
Q9CR55 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9CR55 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Q9CR55 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9CR55 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Q9CR55 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9CR55 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q9CR55 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9CR55 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms