Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.73■□□□□ 0.75
Cstf3Q99LI7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf3Q99LI7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf3Q99LI7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf3Q99LI7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf3Q99LI7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf3Q99LI7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf3Q99LI7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf3Q99LI7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.71■□□□□ 0.75
Cstf3Q99LI7 Gm10399-202ENSMUST00000202768 748 ntBASIC19.71■□□□□ 0.75
Cstf3Q99LI7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf3Q99LI7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf3Q99LI7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf3Q99LI7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cstf3Q99LI7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf3Q99LI7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf3Q99LI7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf3Q99LI7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf3Q99LI7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf3Q99LI7 Gm10232-201ENSMUST00000089221 720 ntBASIC19.7■□□□□ 0.74
Cstf3Q99LI7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf3Q99LI7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf3Q99LI7 Notumos-201ENSMUST00000151998 2659 ntBASIC19.69■□□□□ 0.74
Cstf3Q99LI7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf3Q99LI7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.69■□□□□ 0.74
Cstf3Q99LI7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf3Q99LI7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf3Q99LI7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf3Q99LI7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf3Q99LI7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf3Q99LI7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf3Q99LI7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf3Q99LI7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cstf3Q99LI7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Cstf3Q99LI7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf3Q99LI7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf3Q99LI7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf3Q99LI7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cstf3Q99LI7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.68■□□□□ 0.74
Cstf3Q99LI7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf3Q99LI7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.66■□□□□ 0.74
Cstf3Q99LI7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Cstf3Q99LI7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf3Q99LI7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf3Q99LI7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf3Q99LI7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf3Q99LI7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf3Q99LI7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cstf3Q99LI7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cstf3Q99LI7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf3Q99LI7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf3Q99LI7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf3Q99LI7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cstf3Q99LI7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cstf3Q99LI7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf3Q99LI7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf3Q99LI7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf3Q99LI7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf3Q99LI7 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.64■□□□□ 0.74
Cstf3Q99LI7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf3Q99LI7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.64■□□□□ 0.73
Cstf3Q99LI7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Cstf3Q99LI7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf3Q99LI7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf3Q99LI7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf3Q99LI7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cstf3Q99LI7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf3Q99LI7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf3Q99LI7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf3Q99LI7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf3Q99LI7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf3Q99LI7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf3Q99LI7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf3Q99LI7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf3Q99LI7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf3Q99LI7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf3Q99LI7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.63■□□□□ 0.73
Cstf3Q99LI7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf3Q99LI7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.63■□□□□ 0.73
Cstf3Q99LI7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf3Q99LI7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf3Q99LI7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf3Q99LI7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cstf3Q99LI7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cstf3Q99LI7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cstf3Q99LI7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms