Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.82■□□□□ 0.92
Smarcd2Q99JR8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd2Q99JR8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Smarcd2Q99JR8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd2Q99JR8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd2Q99JR8 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.82■□□□□ 0.92
Smarcd2Q99JR8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd2Q99JR8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcd2Q99JR8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.81■□□□□ 0.92
Smarcd2Q99JR8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcd2Q99JR8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smarcd2Q99JR8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.81■□□□□ 0.92
Smarcd2Q99JR8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcd2Q99JR8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcd2Q99JR8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcd2Q99JR8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Smarcd2Q99JR8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd2Q99JR8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd2Q99JR8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Smarcd2Q99JR8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.8■□□□□ 0.92
Smarcd2Q99JR8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd2Q99JR8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Smarcd2Q99JR8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd2Q99JR8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd2Q99JR8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd2Q99JR8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd2Q99JR8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd2Q99JR8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.79■□□□□ 0.92
Smarcd2Q99JR8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd2Q99JR8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd2Q99JR8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.79■□□□□ 0.92
Smarcd2Q99JR8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd2Q99JR8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd2Q99JR8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcd2Q99JR8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smarcd2Q99JR8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smarcd2Q99JR8 Gm29257-201ENSMUST00000186115 639 ntBASIC20.78■□□□□ 0.92
Smarcd2Q99JR8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.78■□□□□ 0.92
Smarcd2Q99JR8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcd2Q99JR8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcd2Q99JR8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 Gm40848-201ENSMUST00000221998 324 ntBASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd2Q99JR8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smarcd2Q99JR8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smarcd2Q99JR8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Smarcd2Q99JR8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd2Q99JR8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd2Q99JR8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.76■□□□□ 0.91
Smarcd2Q99JR8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.76■□□□□ 0.91
Smarcd2Q99JR8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd2Q99JR8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Smarcd2Q99JR8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd2Q99JR8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd2Q99JR8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Smad6-203ENSMUST00000179458 273 ntBASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Gm7291-201ENSMUST00000199147 382 ntBASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd2Q99JR8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd2Q99JR8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd2Q99JR8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Smarcd2Q99JR8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd2Q99JR8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd2Q99JR8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd2Q99JR8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd2Q99JR8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd2Q99JR8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd2Q99JR8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd2Q99JR8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.73■□□□□ 0.91
Smarcd2Q99JR8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.73■□□□□ 0.91
Smarcd2Q99JR8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd2Q99JR8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.73■□□□□ 0.91
Smarcd2Q99JR8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd2Q99JR8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Smarcd2Q99JR8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd2Q99JR8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Smarcd2Q99JR8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd2Q99JR8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd2Q99JR8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Smarcd2Q99JR8 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.72■□□□□ 0.91
Smarcd2Q99JR8 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms