Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rab40cQ8VHQ4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40cQ8VHQ4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40cQ8VHQ4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rab40cQ8VHQ4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40cQ8VHQ4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40cQ8VHQ4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40cQ8VHQ4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rab40cQ8VHQ4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40cQ8VHQ4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Rab40cQ8VHQ4 Scarna2-201ENSMUST00000157560 414 ntBASIC16.63■□□□□ 0.25
Rab40cQ8VHQ4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40cQ8VHQ4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.63■□□□□ 0.25
Rab40cQ8VHQ4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40cQ8VHQ4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40cQ8VHQ4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40cQ8VHQ4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40cQ8VHQ4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40cQ8VHQ4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40cQ8VHQ4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rab40cQ8VHQ4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40cQ8VHQ4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rab40cQ8VHQ4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40cQ8VHQ4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40cQ8VHQ4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40cQ8VHQ4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40cQ8VHQ4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rab40cQ8VHQ4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Gm9806-201ENSMUST00000051080 552 ntBASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40cQ8VHQ4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Gm16437-201ENSMUST00000025669 507 ntBASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rab40cQ8VHQ4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab40cQ8VHQ4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rab40cQ8VHQ4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Rab40cQ8VHQ4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Rab40cQ8VHQ4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rab40cQ8VHQ4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab40cQ8VHQ4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rab40cQ8VHQ4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab40cQ8VHQ4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab40cQ8VHQ4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rab40cQ8VHQ4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab40cQ8VHQ4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab40cQ8VHQ4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rab40cQ8VHQ4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms