Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.69■□□□□ 0.74
Vps4aQ8VEJ9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.69■□□□□ 0.74
Vps4aQ8VEJ9 Gm9847-201ENSMUST00000052528 599 ntBASIC19.69■□□□□ 0.74
Vps4aQ8VEJ9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps4aQ8VEJ9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps4aQ8VEJ9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps4aQ8VEJ9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps4aQ8VEJ9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps4aQ8VEJ9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps4aQ8VEJ9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vps4aQ8VEJ9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Vps4aQ8VEJ9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps4aQ8VEJ9 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.68■□□□□ 0.74
Vps4aQ8VEJ9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps4aQ8VEJ9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps4aQ8VEJ9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4aQ8VEJ9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4aQ8VEJ9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4aQ8VEJ9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4aQ8VEJ9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4aQ8VEJ9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4aQ8VEJ9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4aQ8VEJ9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Vps4aQ8VEJ9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4aQ8VEJ9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4aQ8VEJ9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4aQ8VEJ9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4aQ8VEJ9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Vps4aQ8VEJ9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4aQ8VEJ9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4aQ8VEJ9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4aQ8VEJ9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4aQ8VEJ9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4aQ8VEJ9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4aQ8VEJ9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Vps4aQ8VEJ9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.65■□□□□ 0.74
Vps4aQ8VEJ9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4aQ8VEJ9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Vps4aQ8VEJ9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vps4aQ8VEJ9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Vps4aQ8VEJ9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vps4aQ8VEJ9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps4aQ8VEJ9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps4aQ8VEJ9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vps4aQ8VEJ9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.64■□□□□ 0.73
Vps4aQ8VEJ9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps4aQ8VEJ9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps4aQ8VEJ9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.64■□□□□ 0.73
Vps4aQ8VEJ9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4aQ8VEJ9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4aQ8VEJ9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4aQ8VEJ9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4aQ8VEJ9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4aQ8VEJ9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Vps4aQ8VEJ9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4aQ8VEJ9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4aQ8VEJ9 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.62■□□□□ 0.73
Vps4aQ8VEJ9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4aQ8VEJ9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4aQ8VEJ9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4aQ8VEJ9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps4aQ8VEJ9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps4aQ8VEJ9 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.61■□□□□ 0.73
Vps4aQ8VEJ9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.61■□□□□ 0.73
Vps4aQ8VEJ9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps4aQ8VEJ9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Vps4aQ8VEJ9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Vps4aQ8VEJ9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps4aQ8VEJ9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps4aQ8VEJ9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps4aQ8VEJ9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps4aQ8VEJ9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps4aQ8VEJ9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps4aQ8VEJ9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps4aQ8VEJ9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps4aQ8VEJ9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps4aQ8VEJ9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps4aQ8VEJ9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps4aQ8VEJ9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Vps4aQ8VEJ9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps4aQ8VEJ9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps4aQ8VEJ9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.59■□□□□ 0.73
Vps4aQ8VEJ9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Vps4aQ8VEJ9 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.59■□□□□ 0.73
Vps4aQ8VEJ9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.59■□□□□ 0.73
Vps4aQ8VEJ9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps4aQ8VEJ9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps4aQ8VEJ9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps4aQ8VEJ9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps4aQ8VEJ9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps4aQ8VEJ9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps4aQ8VEJ9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps4aQ8VEJ9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps4aQ8VEJ9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vps4aQ8VEJ9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps4aQ8VEJ9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.58■□□□□ 0.72
Vps4aQ8VEJ9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.58■□□□□ 0.72
Vps4aQ8VEJ9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Vps4aQ8VEJ9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.58■□□□□ 0.72
Vps4aQ8VEJ9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms