Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Vps39Q8R5L3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps39Q8R5L3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps39Q8R5L3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.44■□□□□ 0.86
Vps39Q8R5L3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps39Q8R5L3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Vps39Q8R5L3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.44■□□□□ 0.86
Vps39Q8R5L3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.44■□□□□ 0.86
Vps39Q8R5L3 Gm10399-202ENSMUST00000202768 748 ntBASIC20.44■□□□□ 0.86
Vps39Q8R5L3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps39Q8R5L3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps39Q8R5L3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps39Q8R5L3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps39Q8R5L3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps39Q8R5L3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps39Q8R5L3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps39Q8R5L3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps39Q8R5L3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps39Q8R5L3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Vps39Q8R5L3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Vps39Q8R5L3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.43■□□□□ 0.86
Vps39Q8R5L3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps39Q8R5L3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Vps39Q8R5L3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps39Q8R5L3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps39Q8R5L3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps39Q8R5L3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vps39Q8R5L3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps39Q8R5L3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps39Q8R5L3 Gm10232-201ENSMUST00000089221 720 ntBASIC20.42■□□□□ 0.86
Vps39Q8R5L3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps39Q8R5L3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Vps39Q8R5L3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps39Q8R5L3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps39Q8R5L3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps39Q8R5L3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps39Q8R5L3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps39Q8R5L3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.41■□□□□ 0.86
Vps39Q8R5L3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps39Q8R5L3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Vps39Q8R5L3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps39Q8R5L3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps39Q8R5L3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps39Q8R5L3 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.41■□□□□ 0.86
Vps39Q8R5L3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vps39Q8R5L3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps39Q8R5L3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps39Q8R5L3 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.39■□□□□ 0.86
Vps39Q8R5L3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.39■□□□□ 0.86
Vps39Q8R5L3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.39■□□□□ 0.85
Vps39Q8R5L3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.39■□□□□ 0.85
Vps39Q8R5L3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps39Q8R5L3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Vps39Q8R5L3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vps39Q8R5L3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Vps39Q8R5L3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps39Q8R5L3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vps39Q8R5L3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Vps39Q8R5L3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps39Q8R5L3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps39Q8R5L3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vps39Q8R5L3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps39Q8R5L3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps39Q8R5L3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms