Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Gm26571-201ENSMUST00000181399 666 ntBASIC22.75■■□□□ 1.23
PdgfcQ8CI19 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PdgfcQ8CI19 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PdgfcQ8CI19 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Gm43060-201ENSMUST00000200621 289 ntBASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Gm40848-201ENSMUST00000221998 324 ntBASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PdgfcQ8CI19 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PdgfcQ8CI19 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PdgfcQ8CI19 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.73■■□□□ 1.23
PdgfcQ8CI19 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
PdgfcQ8CI19 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PdgfcQ8CI19 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PdgfcQ8CI19 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PdgfcQ8CI19 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PdgfcQ8CI19 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.72■■□□□ 1.23
PdgfcQ8CI19 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PdgfcQ8CI19 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.72■■□□□ 1.23
PdgfcQ8CI19 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PdgfcQ8CI19 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfcQ8CI19 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.71■■□□□ 1.23
PdgfcQ8CI19 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC22.71■■□□□ 1.23
PdgfcQ8CI19 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfcQ8CI19 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfcQ8CI19 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfcQ8CI19 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfcQ8CI19 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PdgfcQ8CI19 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PdgfcQ8CI19 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PdgfcQ8CI19 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
PdgfcQ8CI19 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
PdgfcQ8CI19 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PdgfcQ8CI19 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
PdgfcQ8CI19 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PdgfcQ8CI19 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfcQ8CI19 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfcQ8CI19 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfcQ8CI19 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfcQ8CI19 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfcQ8CI19 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfcQ8CI19 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfcQ8CI19 Gm7291-201ENSMUST00000199147 382 ntBASIC22.69■■□□□ 1.22
PdgfcQ8CI19 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfcQ8CI19 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PdgfcQ8CI19 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PdgfcQ8CI19 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PdgfcQ8CI19 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
PdgfcQ8CI19 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.68■■□□□ 1.22
PdgfcQ8CI19 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PdgfcQ8CI19 Gm10493-201ENSMUST00000097270 612 ntBASIC22.68■■□□□ 1.22
PdgfcQ8CI19 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.68■■□□□ 1.22
PdgfcQ8CI19 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC22.67■■□□□ 1.22
PdgfcQ8CI19 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PdgfcQ8CI19 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PdgfcQ8CI19 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PdgfcQ8CI19 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PdgfcQ8CI19 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.66■■□□□ 1.22
PdgfcQ8CI19 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.66■■□□□ 1.22
PdgfcQ8CI19 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
PdgfcQ8CI19 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PdgfcQ8CI19 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PdgfcQ8CI19 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PdgfcQ8CI19 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PdgfcQ8CI19 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PdgfcQ8CI19 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PdgfcQ8CI19 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PdgfcQ8CI19 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PdgfcQ8CI19 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PdgfcQ8CI19 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
PdgfcQ8CI19 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PdgfcQ8CI19 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PdgfcQ8CI19 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.64■■□□□ 1.21
PdgfcQ8CI19 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PdgfcQ8CI19 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PdgfcQ8CI19 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfcQ8CI19 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfcQ8CI19 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfcQ8CI19 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfcQ8CI19 Smad6-203ENSMUST00000179458 273 ntBASIC22.63■■□□□ 1.21
PdgfcQ8CI19 Gm42569-201ENSMUST00000200539 472 ntBASIC22.63■■□□□ 1.21
PdgfcQ8CI19 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC22.63■■□□□ 1.21
PdgfcQ8CI19 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfcQ8CI19 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfcQ8CI19 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfcQ8CI19 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfcQ8CI19 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.62■■□□□ 1.21
PdgfcQ8CI19 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms