Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShfQ8CG80 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShfQ8CG80 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShfQ8CG80 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShfQ8CG80 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShfQ8CG80 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.28■□□□□ 0.52
ShfQ8CG80 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ShfQ8CG80 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ShfQ8CG80 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShfQ8CG80 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShfQ8CG80 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShfQ8CG80 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShfQ8CG80 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ShfQ8CG80 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShfQ8CG80 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ShfQ8CG80 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShfQ8CG80 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShfQ8CG80 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.27■□□□□ 0.52
ShfQ8CG80 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShfQ8CG80 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShfQ8CG80 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShfQ8CG80 Gm45444-201ENSMUST00000211394 898 ntBASIC18.27■□□□□ 0.52
ShfQ8CG80 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ShfQ8CG80 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ShfQ8CG80 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ShfQ8CG80 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
ShfQ8CG80 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.26■□□□□ 0.51
ShfQ8CG80 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ShfQ8CG80 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ShfQ8CG80 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShfQ8CG80 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShfQ8CG80 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShfQ8CG80 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShfQ8CG80 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.26■□□□□ 0.51
ShfQ8CG80 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.26■□□□□ 0.51
ShfQ8CG80 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShfQ8CG80 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShfQ8CG80 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShfQ8CG80 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShfQ8CG80 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShfQ8CG80 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShfQ8CG80 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShfQ8CG80 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShfQ8CG80 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShfQ8CG80 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShfQ8CG80 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShfQ8CG80 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShfQ8CG80 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShfQ8CG80 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShfQ8CG80 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShfQ8CG80 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShfQ8CG80 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
ShfQ8CG80 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShfQ8CG80 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShfQ8CG80 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ShfQ8CG80 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShfQ8CG80 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShfQ8CG80 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ShfQ8CG80 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShfQ8CG80 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.24■□□□□ 0.51
ShfQ8CG80 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ShfQ8CG80 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShfQ8CG80 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ShfQ8CG80 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShfQ8CG80 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShfQ8CG80 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShfQ8CG80 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShfQ8CG80 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShfQ8CG80 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShfQ8CG80 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ShfQ8CG80 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ShfQ8CG80 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ShfQ8CG80 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ShfQ8CG80 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.22■□□□□ 0.51
ShfQ8CG80 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.22■□□□□ 0.51
ShfQ8CG80 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShfQ8CG80 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ShfQ8CG80 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.22■□□□□ 0.51
ShfQ8CG80 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShfQ8CG80 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShfQ8CG80 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ShfQ8CG80 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.21■□□□□ 0.51
ShfQ8CG80 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShfQ8CG80 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.21■□□□□ 0.51
ShfQ8CG80 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShfQ8CG80 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.21■□□□□ 0.51
ShfQ8CG80 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ShfQ8CG80 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShfQ8CG80 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShfQ8CG80 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShfQ8CG80 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShfQ8CG80 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
ShfQ8CG80 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.2■□□□□ 0.5
ShfQ8CG80 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ShfQ8CG80 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShfQ8CG80 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShfQ8CG80 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShfQ8CG80 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShfQ8CG80 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.2■□□□□ 0.5
ShfQ8CG80 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms