Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Pabpn1Q8CCS6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
Pabpn1Q8CCS6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Pabpn1Q8CCS6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC32.74■■■□□ 2.83
Pabpn1Q8CCS6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Pabpn1Q8CCS6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Pabpn1Q8CCS6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC32.73■■■□□ 2.83
Pabpn1Q8CCS6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
Pabpn1Q8CCS6 Reep4-203ENSMUST00000226563 1444 ntBASIC32.73■■■□□ 2.83
Pabpn1Q8CCS6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC32.73■■■□□ 2.83
Pabpn1Q8CCS6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC32.72■■■□□ 2.83
Pabpn1Q8CCS6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Pabpn1Q8CCS6 AC135637.1-201ENSMUST00000227750 365 ntBASIC32.72■■■□□ 2.83
Pabpn1Q8CCS6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Pabpn1Q8CCS6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
Pabpn1Q8CCS6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Pabpn1Q8CCS6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Pabpn1Q8CCS6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC32.71■■■□□ 2.83
Pabpn1Q8CCS6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC32.71■■■□□ 2.83
Pabpn1Q8CCS6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Pabpn1Q8CCS6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Pabpn1Q8CCS6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC32.71■■■□□ 2.83
Pabpn1Q8CCS6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Pabpn1Q8CCS6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Pabpn1Q8CCS6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC32.7■■■□□ 2.83
Pabpn1Q8CCS6 Gm20049-201ENSMUST00000219950 730 ntBASIC32.69■■■□□ 2.82
Pabpn1Q8CCS6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
Pabpn1Q8CCS6 Gm6206-201ENSMUST00000133472 2199 ntBASIC32.68■■■□□ 2.82
Pabpn1Q8CCS6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Pabpn1Q8CCS6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Pabpn1Q8CCS6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Pabpn1Q8CCS6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC32.68■■■□□ 2.82
Pabpn1Q8CCS6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC32.68■■■□□ 2.82
Pabpn1Q8CCS6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
Pabpn1Q8CCS6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Pabpn1Q8CCS6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
Pabpn1Q8CCS6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
Pabpn1Q8CCS6 Gm14281-201ENSMUST00000121700 1294 ntBASIC32.66■■■□□ 2.82
Pabpn1Q8CCS6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Pabpn1Q8CCS6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Pabpn1Q8CCS6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC32.66■■■□□ 2.82
Pabpn1Q8CCS6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
Pabpn1Q8CCS6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC32.66■■■□□ 2.82
Pabpn1Q8CCS6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC32.66■■■□□ 2.82
Pabpn1Q8CCS6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Pabpn1Q8CCS6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Pabpn1Q8CCS6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Pabpn1Q8CCS6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Pabpn1Q8CCS6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC32.63■■■□□ 2.81
Pabpn1Q8CCS6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
Pabpn1Q8CCS6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Pabpn1Q8CCS6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Pabpn1Q8CCS6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Pabpn1Q8CCS6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Pabpn1Q8CCS6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Pabpn1Q8CCS6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Pabpn1Q8CCS6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Pabpn1Q8CCS6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
Pabpn1Q8CCS6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
Pabpn1Q8CCS6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Pabpn1Q8CCS6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Pabpn1Q8CCS6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Pabpn1Q8CCS6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC32.6■■■□□ 2.81
Pabpn1Q8CCS6 Gm43859-201ENSMUST00000200075 1412 ntBASIC32.6■■■□□ 2.81
Pabpn1Q8CCS6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Pabpn1Q8CCS6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
Pabpn1Q8CCS6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Pabpn1Q8CCS6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Pabpn1Q8CCS6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
Pabpn1Q8CCS6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Pabpn1Q8CCS6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
Pabpn1Q8CCS6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC32.58■■■□□ 2.81
Pabpn1Q8CCS6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC32.58■■■□□ 2.81
Pabpn1Q8CCS6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
Pabpn1Q8CCS6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC32.57■■■□□ 2.8
Pabpn1Q8CCS6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Pabpn1Q8CCS6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Pabpn1Q8CCS6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
Pabpn1Q8CCS6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Pabpn1Q8CCS6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Pabpn1Q8CCS6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Pabpn1Q8CCS6 Gm13148-201ENSMUST00000118892 745 ntBASIC32.56■■■□□ 2.8
Pabpn1Q8CCS6 Gm37856-201ENSMUST00000191634 999 ntBASIC32.56■■■□□ 2.8
Pabpn1Q8CCS6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
Pabpn1Q8CCS6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Pabpn1Q8CCS6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC32.56■■■□□ 2.8
Pabpn1Q8CCS6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Pabpn1Q8CCS6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Pabpn1Q8CCS6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC32.55■■■□□ 2.8
Pabpn1Q8CCS6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Pabpn1Q8CCS6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Pabpn1Q8CCS6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Pabpn1Q8CCS6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Pabpn1Q8CCS6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pabpn1Q8CCS6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC32.53■■■□□ 2.8
Pabpn1Q8CCS6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pabpn1Q8CCS6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC32.53■■■□□ 2.8
Pabpn1Q8CCS6 Gm5408-201ENSMUST00000197998 747 ntBASIC32.53■■■□□ 2.8
Pabpn1Q8CCS6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Pabpn1Q8CCS6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC32.53■■■□□ 2.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms