Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf7Q8BTV2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.46■□□□□ 0.87
Cpsf7Q8BTV2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.46■□□□□ 0.87
Cpsf7Q8BTV2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf7Q8BTV2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf7Q8BTV2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf7Q8BTV2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.46■□□□□ 0.87
Cpsf7Q8BTV2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf7Q8BTV2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.46■□□□□ 0.87
Cpsf7Q8BTV2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf7Q8BTV2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf7Q8BTV2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.45■□□□□ 0.86
Cpsf7Q8BTV2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.44■□□□□ 0.86
Cpsf7Q8BTV2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf7Q8BTV2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf7Q8BTV2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf7Q8BTV2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Cpsf7Q8BTV2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf7Q8BTV2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf7Q8BTV2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf7Q8BTV2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf7Q8BTV2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf7Q8BTV2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf7Q8BTV2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf7Q8BTV2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.41■□□□□ 0.86
Cpsf7Q8BTV2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cpsf7Q8BTV2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf7Q8BTV2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf7Q8BTV2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf7Q8BTV2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf7Q8BTV2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf7Q8BTV2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf7Q8BTV2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf7Q8BTV2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf7Q8BTV2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf7Q8BTV2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Cpsf7Q8BTV2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.4■□□□□ 0.86
Cpsf7Q8BTV2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cpsf7Q8BTV2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.39■□□□□ 0.86
Cpsf7Q8BTV2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cpsf7Q8BTV2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
Cpsf7Q8BTV2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf7Q8BTV2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf7Q8BTV2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf7Q8BTV2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf7Q8BTV2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf7Q8BTV2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf7Q8BTV2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf7Q8BTV2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf7Q8BTV2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf7Q8BTV2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf7Q8BTV2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf7Q8BTV2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf7Q8BTV2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf7Q8BTV2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf7Q8BTV2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf7Q8BTV2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cpsf7Q8BTV2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf7Q8BTV2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf7Q8BTV2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Cpsf7Q8BTV2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf7Q8BTV2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf7Q8BTV2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf7Q8BTV2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms