Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Suds3Q8BR65 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Suds3Q8BR65 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Suds3Q8BR65 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Suds3Q8BR65 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.82■□□□□ 0.92
Suds3Q8BR65 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Suds3Q8BR65 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Suds3Q8BR65 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Suds3Q8BR65 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Suds3Q8BR65 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Suds3Q8BR65 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Suds3Q8BR65 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Suds3Q8BR65 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.81■□□□□ 0.92
Suds3Q8BR65 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Suds3Q8BR65 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Suds3Q8BR65 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Suds3Q8BR65 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Suds3Q8BR65 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Suds3Q8BR65 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Suds3Q8BR65 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.8■□□□□ 0.92
Suds3Q8BR65 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Suds3Q8BR65 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.8■□□□□ 0.92
Suds3Q8BR65 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Suds3Q8BR65 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Suds3Q8BR65 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.79■□□□□ 0.92
Suds3Q8BR65 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Suds3Q8BR65 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Suds3Q8BR65 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Suds3Q8BR65 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Suds3Q8BR65 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Suds3Q8BR65 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.79■□□□□ 0.92
Suds3Q8BR65 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Suds3Q8BR65 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Suds3Q8BR65 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Suds3Q8BR65 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Suds3Q8BR65 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Suds3Q8BR65 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.78■□□□□ 0.92
Suds3Q8BR65 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Suds3Q8BR65 Gm7417-201ENSMUST00000192950 473 ntBASIC20.78■□□□□ 0.92
Suds3Q8BR65 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.78■□□□□ 0.92
Suds3Q8BR65 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.78■□□□□ 0.92
Suds3Q8BR65 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Suds3Q8BR65 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Suds3Q8BR65 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Suds3Q8BR65 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Suds3Q8BR65 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Suds3Q8BR65 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Suds3Q8BR65 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.77■□□□□ 0.92
Suds3Q8BR65 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.77■□□□□ 0.92
Suds3Q8BR65 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Suds3Q8BR65 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Suds3Q8BR65 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Suds3Q8BR65 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Suds3Q8BR65 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Suds3Q8BR65 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Suds3Q8BR65 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Suds3Q8BR65 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Suds3Q8BR65 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.76■□□□□ 0.91
Suds3Q8BR65 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.76■□□□□ 0.91
Suds3Q8BR65 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.76■□□□□ 0.91
Suds3Q8BR65 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Suds3Q8BR65 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Suds3Q8BR65 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Suds3Q8BR65 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Suds3Q8BR65 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Suds3Q8BR65 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Suds3Q8BR65 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Suds3Q8BR65 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Suds3Q8BR65 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Suds3Q8BR65 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Suds3Q8BR65 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Suds3Q8BR65 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Suds3Q8BR65 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Suds3Q8BR65 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Suds3Q8BR65 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.74■□□□□ 0.91
Suds3Q8BR65 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.74■□□□□ 0.91
Suds3Q8BR65 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Suds3Q8BR65 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Suds3Q8BR65 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.74■□□□□ 0.91
Suds3Q8BR65 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.74■□□□□ 0.91
Suds3Q8BR65 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Suds3Q8BR65 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Suds3Q8BR65 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Suds3Q8BR65 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Suds3Q8BR65 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.73■□□□□ 0.91
Suds3Q8BR65 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.73■□□□□ 0.91
Suds3Q8BR65 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.73■□□□□ 0.91
Suds3Q8BR65 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.73■□□□□ 0.91
Suds3Q8BR65 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.73■□□□□ 0.91
Suds3Q8BR65 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Suds3Q8BR65 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Suds3Q8BR65 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Suds3Q8BR65 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Suds3Q8BR65 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Suds3Q8BR65 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Suds3Q8BR65 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.72■□□□□ 0.91
Suds3Q8BR65 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Suds3Q8BR65 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Suds3Q8BR65 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.72■□□□□ 0.91
Suds3Q8BR65 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms