Protein–RNA interactions for Protein: Q80X56

Trim69, E3 ubiquitin-protein ligase TRIM69, mousemouse

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim69Q80X56 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim69Q80X56 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim69Q80X56 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim69Q80X56 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim69Q80X56 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim69Q80X56 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim69Q80X56 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim69Q80X56 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim69Q80X56 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim69Q80X56 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim69Q80X56 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim69Q80X56 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim69Q80X56 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim69Q80X56 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim69Q80X56 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim69Q80X56 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.39■□□□□ 0.69
Trim69Q80X56 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trim69Q80X56 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim69Q80X56 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim69Q80X56 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim69Q80X56 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Trim69Q80X56 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Trim69Q80X56 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim69Q80X56 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim69Q80X56 Gm43137-201ENSMUST00000198052 594 ntBASIC19.38■□□□□ 0.69
Trim69Q80X56 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim69Q80X56 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim69Q80X56 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim69Q80X56 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim69Q80X56 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim69Q80X56 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim69Q80X56 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim69Q80X56 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim69Q80X56 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim69Q80X56 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim69Q80X56 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim69Q80X56 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim69Q80X56 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim69Q80X56 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim69Q80X56 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.36■□□□□ 0.69
Trim69Q80X56 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim69Q80X56 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim69Q80X56 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim69Q80X56 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim69Q80X56 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim69Q80X56 Gm6139-201ENSMUST00000079261 882 ntBASIC19.35■□□□□ 0.69
Trim69Q80X56 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim69Q80X56 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim69Q80X56 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim69Q80X56 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim69Q80X56 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim69Q80X56 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim69Q80X56 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim69Q80X56 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim69Q80X56 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim69Q80X56 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim69Q80X56 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim69Q80X56 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.34■□□□□ 0.69
Trim69Q80X56 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim69Q80X56 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim69Q80X56 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.33■□□□□ 0.69
Trim69Q80X56 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
Trim69Q80X56 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Trim69Q80X56 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Trim69Q80X56 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trim69Q80X56 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim69Q80X56 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim69Q80X56 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim69Q80X56 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trim69Q80X56 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.33■□□□□ 0.68
Trim69Q80X56 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
Trim69Q80X56 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim69Q80X56 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim69Q80X56 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim69Q80X56 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim69Q80X56 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim69Q80X56 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim69Q80X56 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim69Q80X56 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim69Q80X56 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim69Q80X56 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim69Q80X56 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trim69Q80X56 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Trim69Q80X56 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim69Q80X56 Mir7075-201ENSMUST00000184187 82 ntBASIC19.3■□□□□ 0.68
Trim69Q80X56 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms