Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx55Q6ZPL9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.62■■□□□ 1.37
Ddx55Q6ZPL9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx55Q6ZPL9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx55Q6ZPL9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx55Q6ZPL9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx55Q6ZPL9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx55Q6ZPL9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx55Q6ZPL9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx55Q6ZPL9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx55Q6ZPL9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx55Q6ZPL9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx55Q6ZPL9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx55Q6ZPL9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Ddx55Q6ZPL9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx55Q6ZPL9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx55Q6ZPL9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx55Q6ZPL9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx55Q6ZPL9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx55Q6ZPL9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx55Q6ZPL9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Ddx55Q6ZPL9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Ddx55Q6ZPL9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Ddx55Q6ZPL9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx55Q6ZPL9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.58■■□□□ 1.37
Ddx55Q6ZPL9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.58■■□□□ 1.36
Ddx55Q6ZPL9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx55Q6ZPL9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.57■■□□□ 1.36
Ddx55Q6ZPL9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx55Q6ZPL9 Gm10033-202ENSMUST00000211874 928 ntBASIC23.57■■□□□ 1.36
Ddx55Q6ZPL9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Ddx55Q6ZPL9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx55Q6ZPL9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx55Q6ZPL9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.57■■□□□ 1.36
Ddx55Q6ZPL9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx55Q6ZPL9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.56■■□□□ 1.36
Ddx55Q6ZPL9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx55Q6ZPL9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx55Q6ZPL9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx55Q6ZPL9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx55Q6ZPL9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx55Q6ZPL9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx55Q6ZPL9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx55Q6ZPL9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.54■■□□□ 1.36
Ddx55Q6ZPL9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx55Q6ZPL9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx55Q6ZPL9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx55Q6ZPL9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx55Q6ZPL9 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.54■■□□□ 1.36
Ddx55Q6ZPL9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx55Q6ZPL9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx55Q6ZPL9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Ddx55Q6ZPL9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx55Q6ZPL9 Gm18671-201ENSMUST00000214826 683 ntBASIC23.53■■□□□ 1.36
Ddx55Q6ZPL9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx55Q6ZPL9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Ddx55Q6ZPL9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.53■■□□□ 1.36
Ddx55Q6ZPL9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.53■■□□□ 1.36
Ddx55Q6ZPL9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx55Q6ZPL9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx55Q6ZPL9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.52■■□□□ 1.36
Ddx55Q6ZPL9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Ddx55Q6ZPL9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx55Q6ZPL9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.51■■□□□ 1.35
Ddx55Q6ZPL9 AV356131-201ENSMUST00000206201 750 ntBASIC23.51■■□□□ 1.35
Ddx55Q6ZPL9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.51■■□□□ 1.35
Ddx55Q6ZPL9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx55Q6ZPL9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx55Q6ZPL9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx55Q6ZPL9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.5■■□□□ 1.35
Ddx55Q6ZPL9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.5■■□□□ 1.35
Ddx55Q6ZPL9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx55Q6ZPL9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx55Q6ZPL9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.5■■□□□ 1.35
Ddx55Q6ZPL9 Gm27011-201ENSMUST00000182352 972 ntBASIC23.5■■□□□ 1.35
Ddx55Q6ZPL9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx55Q6ZPL9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx55Q6ZPL9 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.5■■□□□ 1.35
Ddx55Q6ZPL9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx55Q6ZPL9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.49■■□□□ 1.35
Ddx55Q6ZPL9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx55Q6ZPL9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx55Q6ZPL9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Ddx55Q6ZPL9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.49■■□□□ 1.35
Ddx55Q6ZPL9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms