Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cpsf6Q6NVF9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf6Q6NVF9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf6Q6NVF9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Cpsf6Q6NVF9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf6Q6NVF9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.78■□□□□ 0.76
Cpsf6Q6NVF9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf6Q6NVF9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Cpsf6Q6NVF9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf6Q6NVF9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cpsf6Q6NVF9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf6Q6NVF9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf6Q6NVF9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf6Q6NVF9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf6Q6NVF9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.77■□□□□ 0.76
Cpsf6Q6NVF9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Cpsf6Q6NVF9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf6Q6NVF9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf6Q6NVF9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf6Q6NVF9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cpsf6Q6NVF9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf6Q6NVF9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cpsf6Q6NVF9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf6Q6NVF9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf6Q6NVF9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf6Q6NVF9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf6Q6NVF9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf6Q6NVF9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf6Q6NVF9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cpsf6Q6NVF9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf6Q6NVF9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf6Q6NVF9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf6Q6NVF9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Cpsf6Q6NVF9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf6Q6NVF9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf6Q6NVF9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf6Q6NVF9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf6Q6NVF9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.73■□□□□ 0.75
Cpsf6Q6NVF9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf6Q6NVF9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf6Q6NVF9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf6Q6NVF9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf6Q6NVF9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf6Q6NVF9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf6Q6NVF9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf6Q6NVF9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.72■□□□□ 0.75
Cpsf6Q6NVF9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cpsf6Q6NVF9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf6Q6NVF9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf6Q6NVF9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf6Q6NVF9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf6Q6NVF9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.71■□□□□ 0.75
Cpsf6Q6NVF9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cpsf6Q6NVF9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.71■□□□□ 0.75
Cpsf6Q6NVF9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf6Q6NVF9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf6Q6NVF9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf6Q6NVF9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf6Q6NVF9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cpsf6Q6NVF9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.7■□□□□ 0.74
Cpsf6Q6NVF9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.7■□□□□ 0.74
Cpsf6Q6NVF9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf6Q6NVF9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cpsf6Q6NVF9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf6Q6NVF9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf6Q6NVF9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Cpsf6Q6NVF9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf6Q6NVF9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.69■□□□□ 0.74
Cpsf6Q6NVF9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf6Q6NVF9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cpsf6Q6NVF9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf6Q6NVF9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf6Q6NVF9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cpsf6Q6NVF9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf6Q6NVF9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms